RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	TGFBR1	P36897	503 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	OR10A3	P58181	314 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	ZP1	P60852	638 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	RSU1	Q15404	277 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	IDNK	Q5T6J7	187 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	ZNF787	Q6DD87	383 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	FAM166A	Q6J272	317 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	SLC25A26	Q70HW3	274 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	CDH24	Q86UP0	819 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	ANGPTL5	Q86XS5	388 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	SCCPDH	Q8NBX0	429 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	AQP3	Q92482	292 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	PTX4	Q96A99	478 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	CMTM3	Q96MX0	182 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	LIN7B	Q9HAP6	207 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	RASL12	Q9NYN1	266 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	FBLN5	Q9UBX5	448 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	ADAM30	Q9UKF2	790 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	PPP1R3C	Q9UQK1	317 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	NPTN	Q9Y639	398 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	ARFGEF3	Q5TH69	2177 aa		11.48	□□□□□ -0.57
APTX-231	ENST00000494973	DSCAM	O60469	2012 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973		A0A075B6Q4	140 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	IGKV1-27	A0A075B6S5	117 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	hCG_1807616	A0A1W2PRN6	198 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	NOS1AP	O75052	506 aa	Predicted RBP	11.47	□□□□□ -0.57
APTX-231	ENST00000494973	CLEC2L	P0C7M8	214 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	OR3A4P	P47883	348 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	CCL8	P80075	99 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	HFE	Q30201	348 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	ZNF404	Q494X3	552 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	HES5	Q5TA89	166 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	GLIPR1L1	Q6UWM5	242 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	ASCL4	Q6XD76	172 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	FAM90A1	Q86YD7	464 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	POC1A	Q8NBT0	407 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	OR5D18	Q8NGL1	313 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	OR51F2	Q8NH61	342 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	KCNG3	Q8TAE7	436 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	GTF3A	Q92664	365 aa	Known RBP	11.47	□□□□□ -0.57
APTX-231	ENST00000494973	FAM3D	Q96BQ1	224 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	CEP19	Q96LK0	163 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	SPACA5	Q96QH8	159 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	GFI1	Q99684	422 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	DCUN1D5	Q9BTE7	237 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	FGF23	Q9GZV9	251 aa	Predicted RBP	11.47	□□□□□ -0.57
APTX-231	ENST00000494973	MMP27	Q9H306	513 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	PPP1R3E	Q9H7J1	279 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	ELL3	Q9HB65	397 aa	Predicted RBP	11.47	□□□□□ -0.57
APTX-231	ENST00000494973	C1orf123	Q9NWV4	160 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	PTTG2	Q9NZH5	202 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	ING4	Q9UNL4	249 aa		11.47	□□□□□ -0.57
APTX-231	ENST00000494973	GCN1	Q92616	2671 aa	Known RBP	11.46	□□□□□ -0.57
APTX-231	ENST00000494973	IGHV1-69-2	A0A0G2JMI3	117 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	OVOL3	O00110	214 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	CDIPT	O14735	213 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	NCR1	O76036	304 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	GTF2F2	P13984	249 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	RAB6A	P20340	208 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	COL8A1	P27658	744 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	EFNA4	P52798	201 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	SMIM21	Q3B7S5	101 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	PRAMEF6	Q5VXH4	476 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	ELP2	Q6IA86	826 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	PEG10	Q86TG7	708 aa	Known RBP	11.46	□□□□□ -0.57
APTX-231	ENST00000494973	WDR86	Q86TI4	376 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	LINC00596	Q86U02	117 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	MOGAT3	Q86VF5	341 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	NR2C2AP	Q86WQ0	139 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	CALHM1	Q8IU99	346 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	OR4D6	Q8NGJ1	314 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	MCFD2	Q8NI22	146 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	RDH5	Q92781	318 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	RFT1	Q96AA3	541 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	URM1	Q9BTM9	101 aa	Known RBP	11.46	□□□□□ -0.57
APTX-231	ENST00000494973	GCM1	Q9NP62	436 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	RNF7	Q9UBF6	113 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	GLS2	Q9UI32	602 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	SPATA2	Q9UM82	520 aa		11.46	□□□□□ -0.57
APTX-231	ENST00000494973	PTPN13	Q12923	2485 aa		11.46	□□□□□ -0.58
APTX-231	ENST00000494973	SMIM30	A4D0T7	59 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	METTL21EP	A6NDL7	271 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	FSTL3	O95633	263 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	PLAT	P00750	562 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	CSF3	P09919	207 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	PGA5	P0DJD9	388 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	PAX1	P15863	534 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	S100A5	P33763	92 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	FGF12	P61328	243 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	KCNJ8	Q15842	424 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	CNPY1	Q3B7I2	92 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	NHLRC3	Q5JS37	347 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	SPIN3	Q5JUX0	258 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	WDR82	Q6UXN9	313 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	LINC00299	Q6ZSB3	139 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973		Q8NFD4	153 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	LRRC29	Q8WV35	223 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	IGFBPL1	Q8WX77	278 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	NINJ1	Q92982	152 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	SLC25A28	Q96A46	364 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms