RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 PCK2Q16822 640 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 CDNFQ49AH0 187 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 RIPPLY2Q5TAB7 128 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 PRSS54Q6PEW0 395 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 RHOUQ7L0Q8 258 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 DPY19L4Q7Z388 723 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 ANKRD37Q7Z713 158 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 TMED4Q7Z7H5 227 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 RPS19BP1Q86WX3 136 aaKnown RBP9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 LYPD6Q86Y78 171 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 SULF2Q8IWU5 870 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 PUSL1Q8N0Z8 303 aaKnown RBP9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 C15orf54Q8N8G6 183 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 TMEM52Q8NDY8 209 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 OR4D10Q8NGI6 311 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 OR9A4Q8NGU2 314 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 GLYATL2Q8WU03 294 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 RNASE6Q93091 150 aaKnown RBP9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 SMIM8Q96KF7 97 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 EGLN1Q9GZT9 426 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 OR10A5Q9H207 317 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 TXNIPQ9H3M7 391 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 SAV1Q9H4B6 383 aaPredicted RBP9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 TUBA4BQ9H853 241 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 ZDHHC11Q9H8X9 412 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 PRTFDC1Q9NRG1 225 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 COA4Q9NYJ1 87 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 LPAR3Q9UBY5 353 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 KCNG2Q9UJ96 466 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 FOXD3Q9UJU5 478 aaPredicted RBP9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 MMACHCQ9Y4U1 282 aa9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 RAI1Q7Z5J4 1906 aaPredicted RBP9.27□□□□□ -0.93
PDLIM1-205ENST00000493949 CR1P17927 2039 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 IGLV1-36A0A0B4J1U3 117 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 FRG2CA6NGY1 282 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 NPIPA2E9PIF3 369 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 NPIPA3F8WFD2 350 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 H0YIG0 161 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 MFNGO00587 321 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 GNB5O14775 395 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 OR2T1O43869 369 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 SMPD2O60906 423 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 CA11O75493 328 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 SRSF10O75494 262 aaKnown RBP9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 OR6A2O95222 327 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 GAPDHP04406 335 aaKnown RBP9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 IFNA6P05013 189 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 ASCL1P50553 236 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 EFNB2P52799 333 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 ID2Q02363 134 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 GUCA2AQ02747 115 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 GLO1Q04760 184 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 PPA1Q15181 289 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 TAF13Q15543 124 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 MEP1BQ16820 701 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 ZNF260Q3ZCT1 412 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 TMEM128Q5BJH2 165 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 LDLRAD3Q86YD5 345 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 SLC22A24Q8N4F4 322 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 C10orf53Q8N6V4 93 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 ZNF615Q8N8J6 731 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 RELL2Q8NC24 303 aaPredicted RBP9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 OR1S2Q8NGQ3 325 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 TSLPQ969D9 159 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 PIGTQ969N2 578 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 SLC25A44Q96H78 314 aaPredicted RBP9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 OR5B2Q96R09 309 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 C12orf57Q99622 126 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 SMCO4Q9NRQ5 59 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 MYEF2Q9P2K5 600 aaKnown RBP9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 ASH2LQ9UBL3 628 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 B9D1Q9UPM9 204 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 KPTNQ9Y664 436 aa9.26□□□□□ -0.93
PDLIM1-205ENST00000493949 PHF1O43189 567 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 WDR1O75083 606 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 S100A9P06702 114 aaKnown RBP9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 PTHLHP12272 177 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 PGCP20142 388 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 GRPRP30550 384 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 MMP16P51512 607 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 CAV2P51636 162 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 ZP4Q12836 540 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 PPP1R1AQ13522 171 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 GLYATL3Q5SZD4 288 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 ZNF585AQ6P3V2 769 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 ZNF627Q7L945 461 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 MDGA2Q7Z553 956 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 HOGA1Q86XE5 327 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 MISPQ8IVT2 679 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 CCDC54Q8NEL0 328 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 OR13C3Q8NGS6 347 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 NUDCD2Q8WVJ2 157 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 MOGAT1Q96PD6 335 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 SLC6A7Q99884 636 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 TINAGL1Q9GZM7 467 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 CHST6Q9GZX3 395 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 SYT4Q9H2B2 425 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 SMDT1Q9H4I9 107 aa9.25□□□□□ -0.93
PDLIM1-205ENST00000493949 SRA1Q9HD15 236 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms