RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ATP1B3P54709 279 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 BPIFB3P59826 476 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 NANOS3P60323 173 aaKnown RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 FGF12P61328 243 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 ELF3P78545 371 aaPredicted RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 IL13RA1P78552 427 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 ADARB1P78563 741 aaKnown RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 SLC34A1Q06495 639 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 IKZF1Q13422 519 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 ALKBH1Q13686 389 aaKnown RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 CNN3Q15417 329 aaKnown RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 UBE2V2Q15819 145 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 SMN1Q16637 294 aaKnown RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 OGFRL1Q5TC84 451 aaPredicted RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 METTL11BQ5VVY1 283 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 STUMQ69YW2 141 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 TMPRSS11AQ6ZMR5 421 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 ACP7Q6ZNF0 438 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 USP43Q70EL4 1123 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 C8orf59Q8N0T1 100 aaPredicted RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 ZNF676Q8N7Q3 588 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 POC1AQ8NBT0 407 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 ANGPTL6Q8NI99 470 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 CNIH3Q8TBE1 160 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 APH1BQ8WW43 257 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 UPRTQ96BW1 309 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 FGGYQ96C11 551 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 SEH1LQ96EE3 360 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 BORCS8Q96FH0 119 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 DMRTB1Q96MA1 342 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 PCGF1Q9BSM1 259 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 PKIBQ9C010 78 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 CHST5Q9GZS9 411 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 MS4A7Q9GZW8 240 aaPredicted RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 COMMD4Q9H0A8 199 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 ISG20L2Q9H9L3 353 aaKnown RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 NEK6Q9HC98 313 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 SMURF1Q9HCE7 757 aa5.79□□□□□ -1.48
TOP3A-207ENST00000493648 FGF20Q9NP95 211 aaPredicted RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 CHCHD3Q9NX63 227 aaKnown RBP5.79□□□□□ -1.48
TOP3A-207ENST00000493648 TRBV2A0A0J9YWF9 115 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 TMEM212A6NML5 194 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 OR4C45A6NMZ5 311 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 C22orf46C9J442 243 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 SLC1A7O00341 560 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 SIGLEC5O15389 551 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 SYNGR1O43759 233 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 WBP4O75554 376 aaKnown RBP5.78□□□□□ -1.48
TOP3A-207ENST00000493648 RGS9O75916 674 aaPredicted RBP5.78□□□□□ -1.48
TOP3A-207ENST00000493648 NXPH2O95156 264 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 CYB5AP00167 134 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 FSHBP01225 129 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 PGA5P0DJD9 388 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 PSG2P11465 335 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 NDUFB7P17568 137 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 ATF1P18846 271 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 MYL12AP19105 171 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 AMY2BP19961 511 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 MPZP25189 248 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 PRDX2P32119 198 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 RBP2P50120 134 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 MTCP1P56278 107 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 HILS1P60008 231 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 ARF6P62330 175 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 IL24Q13007 206 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 PDCD1Q15116 288 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 SMIM21Q3B7S5 101 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 CCDC58Q4VC31 144 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 KLF17Q5JT82 389 aaPredicted RBP5.78□□□□□ -1.48
TOP3A-207ENST00000493648 ZNF788Q6ZQV5 615 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 UTS2BQ765I0 119 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 ANGPTL5Q86XS5 388 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 SERPINA12Q8IW75 414 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 MKXQ8IYA7 352 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 CMTM4Q8IZR5 234 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 ZNF561Q8N587 486 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 FAM216BQ8N7L0 139 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 DNAAF1Q8NEP3 725 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 OR5D14Q8NGL3 314 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 OR13C3Q8NGS6 347 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 OR5AK2Q8NH90 309 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 TRMT10AQ8TBZ6 339 aaKnown RBP5.78□□□□□ -1.48
TOP3A-207ENST00000493648 NPRL2Q8WTW4 380 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 ZFAND2BQ8WV99 257 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 C22orf15Q8WYQ4 148 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 H1FXQ92522 213 aaKnown RBP5.78□□□□□ -1.48
TOP3A-207ENST00000493648 DACT3Q96B18 629 aaPredicted RBP5.78□□□□□ -1.48
TOP3A-207ENST00000493648 TMEM80Q96HE8 168 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 WDFY2Q96P53 400 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 GAFA1Q96PS6 74 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 SLC6A7Q99884 636 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 ZNF649Q9BS31 505 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 JAM3Q9BX67 310 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 BABAM2Q9NXR7 383 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 SLC25A10Q9UBX3 287 aaPredicted RBP5.78□□□□□ -1.48
TOP3A-207ENST00000493648 ZNF69Q9UC07 566 aa5.78□□□□□ -1.48
TOP3A-207ENST00000493648 RPUSD1Q9UJJ7 312 aaKnown RBP5.78□□□□□ -1.48
TOP3A-207ENST00000493648 CAB39Q9Y376 341 aaPredicted RBP5.78□□□□□ -1.48
TOP3A-207ENST00000493648 EXOSC1Q9Y3B2 195 aaKnown RBP5.78□□□□□ -1.48
TOP3A-207ENST00000493648 IGKV1D-17A0A075B6S4 117 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms