RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 C12orf43Q96C57 262 aaKnown RBP11.67□□□□□ -0.54
CCM2-217ENST00000492883 FAHD2AQ96GK7 314 aa11.67□□□□□ -0.54
CCM2-217ENST00000492883 OPALINQ96PE5 141 aa11.67□□□□□ -0.54
CCM2-217ENST00000492883 OR5M11Q96RB7 305 aa11.67□□□□□ -0.54
CCM2-217ENST00000492883 SSBP3Q9BWW4 388 aaPredicted RBP11.67□□□□□ -0.54
CCM2-217ENST00000492883 PKIBQ9C010 78 aa11.67□□□□□ -0.54
CCM2-217ENST00000492883 LRCH1Q9Y2L9 728 aa11.67□□□□□ -0.54
CCM2-217ENST00000492883 IGKV1-27A0A075B6S5 117 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.66□□□□□ -0.54
CCM2-217ENST00000492883 TMPRSS2O15393 492 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 INMTO95050 263 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 HCKP08631 526 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 HSMCR30P0CW71 290 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 RAB3AP20336 220 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 ZFP36P26651 326 aaKnown RBP11.66□□□□□ -0.54
CCM2-217ENST00000492883 BDH1Q02338 343 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 ACSM1Q08AH1 577 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 CR1LQ2VPA4 569 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 SLC36A1Q7Z2H8 476 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 POC1AQ8NBT0 407 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 OR13C5Q8NGS8 318 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 PGLYRP3Q96LB9 341 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 ZNF488Q96MN9 340 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 CCL13Q99616 98 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 RASL12Q9NYN1 266 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 NLKQ9UBE8 527 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 CLN8Q9UBY8 286 aa11.66□□□□□ -0.54
CCM2-217ENST00000492883 F8P00451 2351 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 HIVEP1P15822 2718 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 A0A0G2JMP0 313 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 A0A0X1KG70 313 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 TNFRSF13BO14836 293 aaPredicted RBP11.65□□□□□ -0.54
CCM2-217ENST00000492883 MAGEB3O15480 346 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 SULT1B1O43704 296 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 ALX3O95076 343 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 NXPH2O95156 264 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 CYB5AP00167 134 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 PGA5P0DJD9 388 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 MPZP25189 248 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 MAP2K4P45985 399 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 GABRA2P47869 451 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 POU3F4P49335 361 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 NPY4RP50391 375 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 IL24Q13007 206 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 Q499Y3 187 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 FAM120AOSQ5T036 256 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 DCAF12L2Q5VW00 463 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 SLC25A26Q70HW3 274 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 MKXQ8IYA7 352 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 BATF2Q8N1L9 274 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 OR4M2Q8NGB6 313 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 RFT1Q96AA3 541 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 BEX2Q9BXY8 128 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 SHARPINQ9H0F6 387 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 TMEM160Q9NX00 188 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 TAS2R4Q9NYW5 299 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 OR5V1Q9UGF6 321 aa11.65□□□□□ -0.54
CCM2-217ENST00000492883 LSM2Q9Y333 95 aaKnown RBP11.65□□□□□ -0.54
CCM2-217ENST00000492883 TRBV5-5A0A0J9YX44 114 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 NKX6-3A6NJ46 265 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 OR2AT4A6NND4 320 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 NOS1APO75052 506 aaPredicted RBP11.64□□□□□ -0.55
CCM2-217ENST00000492883 CRLF1O75462 422 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 CD1AP06126 327 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 ACAA1P09110 424 aaPredicted RBP11.64□□□□□ -0.55
CCM2-217ENST00000492883 HNF1AP20823 631 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 RPS11P62280 158 aaKnown RBP eCLIP11.64□□□□□ -0.55
CCM2-217ENST00000492883 PPP3R1P63098 170 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 DOC2BQ14184 412 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 SMIM21Q3B7S5 101 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 CHRFAM7AQ494W8 412 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 ATPAF1Q5TC12 328 aaPredicted RBP11.64□□□□□ -0.55
CCM2-217ENST00000492883 WDR25Q64LD2 544 aaPredicted RBP11.64□□□□□ -0.55
CCM2-217ENST00000492883 ZNF841Q6ZN19 808 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 ACP7Q6ZNF0 438 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 SATL1Q86VE3 508 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 UFD1Q92890 307 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 SLAMF9Q96A28 289 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 CEP19Q96LK0 163 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 SPACA5Q96QH8 159 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 NRIP2Q9BQI9 281 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 YTHDF1Q9BYJ9 559 aaKnown RBP11.64□□□□□ -0.55
CCM2-217ENST00000492883 MMP26Q9NRE1 261 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 KAAG1Q9UBP8 84 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 CTSZQ9UBR2 303 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 CKLFQ9UBR5 152 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 CDC42EP3Q9UKI2 254 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 DYSFO75923 2080 aa11.64□□□□□ -0.55
CCM2-217ENST00000492883 LOC105371242A0A075B767 164 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 A0A1W2PPK0 400 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 KIAA1324LA8MWY0 1029 aaPredicted RBP11.63□□□□□ -0.55
CCM2-217ENST00000492883 A8MXK9 166 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 TRAPPC2LH3BP13 241 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 DVL1O14640 695 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 SPRY1O43609 319 aaPredicted RBP11.63□□□□□ -0.55
CCM2-217ENST00000492883 NDUFB3O43676 98 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 PSG2P11465 335 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 GATA3P23771 443 aa11.63□□□□□ -0.55
CCM2-217ENST00000492883 GABARAPL2P60520 117 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms