RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 ZNF696Q9H7X3 374 aa12.57□□□□□ -0.4
CDC42SE1-205ENST00000491825 C1orf123Q9NWV4 160 aa12.57□□□□□ -0.4
CDC42SE1-205ENST00000491825 DCAF16Q9NXF7 216 aa12.57□□□□□ -0.4
CDC42SE1-205ENST00000491825 SLC7A11Q9UPY5 501 aa12.57□□□□□ -0.4
CDC42SE1-205ENST00000491825 IGKV1-9A0A0C4DH69 117 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 PNMA8CA0A1B0GUJ8 204 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 A6NLC8 198 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 SULT1B1O43704 296 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 IGHV2-70P01814 119 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 GRPP07492 148 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 ATF1P18846 271 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 FSTP19883 344 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 PRKACBP22694 351 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 MPZP25189 248 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 PSMA1P25786 263 aaKnown RBP12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 MAPK3P27361 379 aaPredicted RBP12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 FUT6P51993 359 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 BTG1P62324 171 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 ASPHD2Q6ICH7 369 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 FAHD2BQ6P2I3 314 aaPredicted RBP12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 WDR82Q6UXN9 313 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 KCTD8Q6ZWB6 473 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 USP43Q70EL4 1123 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 PEG10Q86TG7 708 aaKnown RBP12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 ZNF573Q86YE8 665 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 OR13C5Q8NGS8 318 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 OR10Z1Q8NGY1 313 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 FAHD2AQ96GK7 314 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 ZCCHC4Q9H5U6 513 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 UFSP2Q9NUQ7 469 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 RNF7Q9UBF6 113 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 NPTNQ9Y639 398 aa12.56□□□□□ -0.4
CDC42SE1-205ENST00000491825 LOC105371242A0A075B767 164 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 TRBV5-7A0A0A0MS05 114 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 CDIPTO14735 213 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 GPX5O75715 221 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 SC5DO75845 299 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 LHBP01229 141 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 HSMCR30P0CW71 290 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 EPHA1P21709 976 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 AZGP1P25311 298 aaKnown RBP12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 HILS1P60008 231 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 SCGB2A2Q13296 93 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 TRAM1Q15629 374 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 TMEM155Q4W5P6 130 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 LIPKQ5VXJ0 399 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 LHFPL2Q6ZUX7 228 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 GCSAMQ8N6F7 178 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 SCCPDHQ8NBX0 429 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 OR13C9Q8NGT0 318 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 AQP3Q92482 292 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 RPL3LQ92901 407 aaKnown RBP12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 RAB39BQ96DA2 213 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 BORCS8Q96FH0 119 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 DERL3Q96Q80 235 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 OR14A2Q96R54 314 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 NR1H4Q96RI1 486 aaPredicted RBP12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 PKIBQ9C010 78 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 NEK6Q9HC98 313 aa12.55□□□□□ -0.4
CDC42SE1-205ENST00000491825 hCG_1807616A0A1W2PRN6 198 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 SRRM5B3KS81 715 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 ZNF879B4DU55 563 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 J3QT63 122 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 CYB5R3P00387 301 aaPredicted RBP12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 CFPP27918 469 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 GABRA5P31644 462 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 MDH2P40926 338 aaKnown RBP12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 HAAOP46952 286 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 SOX2P48431 317 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 COMPP49747 757 aaPredicted RBP12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 RBP2P50120 134 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 IL24Q13007 206 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 HNRNPA0Q13151 305 aaKnown RBP12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 ZMYND11Q15326 602 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 DMRTC1Q5HYR2 192 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 ZNF826PQ6ZT77 177 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 C1QL2Q7Z5L3 287 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 MUC20Q8N307 709 aaPredicted RBP12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 ZNF418Q8TF45 676 aaPredicted RBP12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 NDUFB11Q9NX14 153 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 POLDIP2Q9Y2S7 368 aa12.54□□□□□ -0.4
CDC42SE1-205ENST00000491825 IGKV1-27A0A075B6S5 117 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 PPIAL4EA0A075B759 164 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 A0A087WXM4 84 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 A0A0G2JMP0 313 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 A0A0X1KG70 313 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 FAM230AA0A1W2PPH8 454 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 TRIM64CA6NLI5 447 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 PPIAL4DF5H284 164 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 J3QLI3 93 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 RGS9O75916 674 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 FSHBP01225 129 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 ACAA1P09110 424 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 PPIAL4FP0DN26 164 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 IGFBP3P17936 291 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 RAB3AP20336 220 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 PPP3R1P63098 170 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 SSX1Q16384 188 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 ZNF404Q494X3 552 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 ARMCX4Q5H9R4 360 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms