RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 TPRKBQ9Y3C4 175 aa13.57□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SIRT4Q9Y6E7 314 aaPredicted RBP13.57□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 IGKV1-9A0A0C4DH69 117 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 J3QLI3 93 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 PRKACBP22694 351 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 MPZP25189 248 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 WNT4P56705 351 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 TAS2R43P59537 309 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 WDR25Q64LD2 544 aaPredicted RBP13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ANGPTL5Q86XS5 388 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 DNAAF1Q8NEP3 725 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 GPR148Q8TDV2 347 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 RGP1Q92546 391 aaPredicted RBP13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SPSB1Q96BD6 273 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 TMIGD2Q96BF3 282 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 TMPRSS13Q9BYE2 586 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SNTG1Q9NSN8 517 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 PAK1IP1Q9NWT1 392 aaPredicted RBP13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 NLKQ9UBE8 527 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ERGIC3Q9Y282 383 aa13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ANK3Q12955 4377 aaKnown RBP13.56□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 IGKV1-27A0A075B6S5 117 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 NKX6-3A6NJ46 265 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 TRAPPC2LH3BP13 241 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 TMPRSS2O15393 492 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 OCM2P0CE71 109 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 OCMP0CE72 109 aaPredicted RBP13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 FAM157CP0CG43 387 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 PGA5P0DJD9 388 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SRD5A1P18405 259 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 AZGP1P25311 298 aaKnown RBP13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 RBP2P50120 134 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ATP1B3P54709 279 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SLC35A2P78381 396 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 IL24Q13007 206 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 RNLSQ5VYX0 342 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 DMKNQ6E0U4 476 aaPredicted RBP13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 LHFPL2Q6ZUX7 228 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SLC36A1Q7Z2H8 476 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 CALHM1Q8IU99 346 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SERPINA12Q8IW75 414 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 PARP16Q8N5Y8 322 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 NANOGP1Q8N7R0 232 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ZFP41Q8N8Y5 198 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 OR13C9Q8NGT0 318 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ZNF488Q96MN9 340 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 CCL13Q99616 98 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 MND1Q9BWT6 205 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ZCCHC4Q9H5U6 513 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 NEK6Q9HC98 313 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 MMP26Q9NRE1 261 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 RASL12Q9NYN1 266 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ZNF281Q9Y2X9 895 aa13.55□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 NOS1APO75052 506 aaPredicted RBP13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 MT-ND2P03891 347 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SRP14P37108 136 aaKnown RBP13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SOX2P48431 317 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SMIM21Q3B7S5 101 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ATPAF1Q5TC12 328 aaPredicted RBP13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ACP7Q6ZNF0 438 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 TEX29Q8N6K0 151 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 OR5T2Q8NGG2 359 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 OR5D14Q8NGL3 314 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ANGPTL6Q8NI99 470 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SGCDQ92629 289 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 OPALINQ96PE5 141 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ZNF184Q99676 751 aaPredicted RBP13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 NRIP2Q9BQI9 281 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 CDCA4Q9BXL8 241 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 DNTTIP1Q9H147 329 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SMURF1Q9HCE7 757 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 INSIG2Q9Y5U4 225 aa13.54□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 LOC105371242A0A075B767 164 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 IGHV2-70DA0A0C4DH43 119 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 A0A1B0GW55 424 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 OR2AT4A6NND4 320 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 DVL1O14640 695 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SULT1B1O43704 296 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 NXPH2O95156 264 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 PLATP00750 562 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 CD2P06729 351 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 ACAA1P09110 424 aaPredicted RBP13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 DUX4L2P0CJ85 424 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 DUX4L3P0CJ86 424 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 DUX4L4P0CJ87 422 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 DUX4L5P0CJ88 424 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 DUX4L6P0CJ89 424 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 DUX4L7P0CJ90 424 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 AMY2BP19961 511 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 CRHBPP24387 322 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 MTCP1P56278 107 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 PAX2Q02962 417 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 RBM48Q5RL73 367 aaKnown RBP13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 DUX4L9Q6RFH8 374 aaPredicted RBP13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 BTNL3Q6UXE8 466 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 SLC25A26Q70HW3 274 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 BATF2Q8N1L9 274 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 FAM216BQ8N7L0 139 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 GHSRQ92847 366 aa13.53□□□□□ -0.24
MSH5-SAPCD1-206ENST00000491552 PGLYRP3Q96LB9 341 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms