RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 H7C417 338 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 XRCC2O43543 280 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 MTRF1O75570 445 aaKnown RBP6.44□□□□□ -1.38
CLDN1-202ENST00000490800 LY6HO94772 140 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 PAHP00439 452 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 NGFP01138 241 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 IGLV1-44P01699 117 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 CECR9P0C854 216 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 FAHP16930 419 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 ACKR3P25106 362 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 CFPP27918 469 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 BDKRB2P30411 391 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 TNFSF8P32971 234 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 S100A5P33763 92 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 THBS4P35443 961 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 PSMD7P51665 324 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 PPP3R1P63098 170 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 FAM3AP98173 230 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 DYNC1I2Q13409 638 aaKnown RBP6.44□□□□□ -1.38
CLDN1-202ENST00000490800 OR8B8Q15620 311 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 HES5Q5TA89 166 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 MZT2AQ6P582 158 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 CLEC2AQ6UVW9 174 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 RFPL4BQ6ZWI9 263 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 CCDC190Q86UF4 302 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 LYPD6Q86Y78 171 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 SERPINA12Q8IW75 414 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 LAX1Q8IWV1 398 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 ZNF101Q8IZC7 436 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 OR5AS1Q8N127 324 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 SEMA6DQ8NFY4 1073 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 OR1M1Q8NGA1 313 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 OR5D14Q8NGL3 314 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 OR13C9Q8NGT0 318 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 OR5H6Q8NGV6 325 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 ACOT12Q8WYK0 555 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 FAM168AQ92567 244 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 C10orf35Q96D05 121 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 WDFY2Q96P53 400 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 CDH20Q9HBT6 801 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 TBCCD1Q9NVR7 557 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 PTTG3PQ9NZH4 202 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 COMMD3Q9UBI1 195 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 PIGLQ9Y2B2 252 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 RHBDD3Q9Y3P4 386 aa6.44□□□□□ -1.38
CLDN1-202ENST00000490800 HEATR1Q9H583 2144 aaKnown RBP6.44□□□□□ -1.38
CLDN1-202ENST00000490800 CUBNO60494 3623 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 IGKV1-9A0A0C4DH69 117 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 CLDN25C9JDP6 229 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 SLC17A2O00624 439 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 RGS5O15539 181 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 SULT1B1O43704 296 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 HPGDSO60760 199 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 TMEM127O75204 238 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 CRYAAP02489 173 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 ZNF35P13682 527 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 SLC25A16P16260 332 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 RAB3AP20336 220 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 SERPINF1P36955 418 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 ETV6P41212 452 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 EFNA4P52798 201 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 CLDN12P56749 244 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 LOXL1Q08397 574 aaPredicted RBP6.43□□□□□ -1.38
CLDN1-202ENST00000490800 RIPPLY1Q0D2K3 151 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 MALLQ13021 153 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 GK2Q14410 553 aaPredicted RBP6.43□□□□□ -1.38
CLDN1-202ENST00000490800 HLXQ14774 488 aaPredicted RBP6.43□□□□□ -1.38
CLDN1-202ENST00000490800 ZNF846Q147U1 533 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 P2RY14Q15391 338 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 RAB11BQ15907 218 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 TMEM249Q2WGJ8 235 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 C3orf36Q3SXR2 165 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 C1orf100Q5SVJ3 147 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 C1QTNF12Q5T7M4 302 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 DDI2Q5TDH0 399 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 GLT8D1Q68CQ7 371 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 TMEM42Q69YG0 159 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 FAM166AQ6J272 317 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 PGAP1Q75T13 922 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 UTS2BQ765I0 119 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 RNF144BQ7Z419 303 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 Q8N1Y9 231 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 NKAIN3Q8N8D7 197 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 OR52N4Q8NGI2 321 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 TRMT10AQ8TBZ6 339 aaKnown RBP6.43□□□□□ -1.38
CLDN1-202ENST00000490800 LGALS14Q8TCE9 139 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 C10orf105Q8TEF2 133 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 ZFAND2BQ8WV99 257 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 S100ZQ8WXG8 99 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 PP6455Q8WZ26 134 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 SLC25A28Q96A46 364 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 CEP19Q96LK0 163 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 NKX3-1Q99801 234 aaPredicted RBP6.43□□□□□ -1.38
CLDN1-202ENST00000490800 VRK1Q99986 396 aaPredicted RBP6.43□□□□□ -1.38
CLDN1-202ENST00000490800 WDR12Q9GZL7 423 aaKnown RBP6.43□□□□□ -1.38
CLDN1-202ENST00000490800 CHST5Q9GZS9 411 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 OR51B6Q9H340 312 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 PLEKHA1Q9HB21 404 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 MOV10Q9HCE1 1003 aaKnown RBP6.43□□□□□ -1.38
CLDN1-202ENST00000490800 TMEM138Q9NPI0 162 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms