RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 CDC42EP2O14613 210 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 SPAG7O75391 227 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 BRI3O95415 125 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 VIMP08670 466 aaKnown RBP5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 OR8U8P0C7N1 319 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 SLC2A1P11166 492 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 IDO1P14902 403 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 GNALP38405 381 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 POLR2JP52435 117 aaKnown RBP5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 TAS2R41P59536 307 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 ABCE1P61221 599 aaKnown RBP5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 CFHR3Q02985 330 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 FOXE3Q13461 319 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 PNLIPRP3Q17RR3 467 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 CXorf66Q5JRM2 361 aaPredicted RBP5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 LGALS9CQ6DKI2 356 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 TMEM65Q6PI78 240 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 DRAM2Q6UX65 266 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 CPLX4Q7Z7G2 160 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 SGPP2Q8IWX5 399 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 OR6Q1Q8NGQ2 317 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 HPSE2Q8WWQ2 592 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 DCUN1D4Q92564 292 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 STMN2Q93045 179 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 SPTSSAQ969W0 71 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 PKNOX2Q96KN3 472 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 POLR2J2Q9GZM3 115 aaKnown RBP5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 POLR2J3Q9H1A7 115 aaKnown RBP5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 PNPOQ9NVS9 261 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 DPM3Q9P2X0 92 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 A4GNTQ9UNA3 340 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 HTR3EA5X5Y0 456 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM90A18PA6NE21 464 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM90A16PA6NEW6 464 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM90A20PA6NIJ5 464 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 RFPL4AA6NLU0 287 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM90A9PA6NNJ1 464 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM90A12PA8MX19 464 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM90A5PA8MXJ8 464 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 RFPL4AL1F8VTS6 287 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 OVOL1O14753 267 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 SLPIP03973 132 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 TK1P04183 234 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 ELANEP08246 267 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM90A15PP0C7V4 464 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM90A13PP0C7W8 464 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM90A14PP0C7W9 464 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM90A24PP0C7X0 464 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 TNFRSF1BP20333 461 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 PPIBP23284 216 aaKnown RBP5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 CDKN2AP42771 156 aaKnown RBP5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 ZNF616Q08AN1 781 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 GPR50Q13585 617 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 KIAA0141Q14154 515 aaPredicted RBP5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 PAGE3Q5JUK9 113 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 ACSM6Q6P461 480 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 LINC00322Q6ZN03 302 aaPredicted RBP5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 SLC35E3Q7Z769 313 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 OAFQ86UD1 273 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 NRMQ8IXM6 262 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 ZNF561Q8N587 486 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 C11orf65Q8NCR3 313 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 OR5P3Q8WZ94 311 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 OR8B4Q96RC9 309 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 MICU1Q9BPX6 476 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 RTL8AQ9BWD3 113 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 PAPOLGQ9BWT3 736 aaKnown RBP5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 CLEC7AQ9BXN2 247 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 TMEM133Q9H2Q1 129 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 GNB4Q9HAV0 340 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 NRIP3Q9NQ35 241 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 PAPOLBQ9NRJ5 636 aaKnown RBP5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 MRPL22Q9NWU5 206 aaKnown RBP5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 B9D1Q9UPM9 204 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 SESN1Q9Y6P5 492 aa5.46□□□□□ -1.54
PDLIM1-203ENST00000490391 NUPR2A6NF83 97 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 ANXA2P2A6NMY6 339 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 EFCAB9A8MZ26 197 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 C12orf77C9JDV5 145 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 SLC1A7O00341 560 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 SLC22A2O15244 555 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 HSPA12AO43301 675 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 FGF16O43320 207 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 XRCC2O43543 280 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 MMP23AO75900 390 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 DNAJC8O75937 253 aaPredicted RBP5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 IGLV1-47P01700 117 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 IGHG4P01861 327 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 PSKH1P11801 424 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 ARSBP15848 533 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 PSMB8P28062 276 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 PRDX2P32119 198 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 KIR3DL2P43630 455 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 SLC1A6P48664 564 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 GNB1P62873 340 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 RUNX1Q01196 453 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 BDH1Q02338 343 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 PRKCDQ05655 676 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 PMS2P11Q13670 270 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 PATL1Q86TB9 770 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms