RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 GGTLC3B5MD39 225 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 ZNF73O43830 326 aaPredicted RBP1.76□□□□□ -2.13
CCDC39-206ENST00000489868 TTC4O95801 387 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 SLC35G6P0C7Q6 338 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 PAX6P26367 422 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 PAFAH1B2P68402 229 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 RPL18AQ02543 176 aaKnown RBP1.76□□□□□ -2.13
CCDC39-206ENST00000489868 FAM43BQ6ZT52 329 aaPredicted RBP1.76□□□□□ -2.13
CCDC39-206ENST00000489868 LINC00337Q8N6G1 96 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 ZDHHC22Q8N966 263 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 CYB561A3Q8NBI2 242 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 PLXNB3Q9ULL4 1909 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 SLC22A20A6NK97 555 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 GOLGA8JA6NMD2 632 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 SYNGR2O43760 224 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 LCA5LO95447 670 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 CXorf1O96002 111 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 TRGV3P03979 118 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 GOLGA8HP0CJ92 632 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 ZNF708P17019 499 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 CD82P27701 267 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 SLC35A1P78382 337 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 SLC7A5P1Q8MH63 180 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 TRAM1L1Q8N609 369 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 ORAOV1Q8WV07 137 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 RNF170Q96K19 258 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 API5Q9BZZ5 524 aaKnown RBP1.75□□□□□ -2.13
CCDC39-206ENST00000489868 PXMP2Q9NR77 195 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 RABL2BQ9UNT1 228 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 ICOSQ9Y6W8 199 aa1.75□□□□□ -2.13
CCDC39-206ENST00000489868 SPATA31E1Q6ZUB1 1445 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 SETD1AO15047 1707 aaKnown RBP1.74□□□□□ -2.13
CCDC39-206ENST00000489868 ZNF99A8MXY4 864 aaPredicted RBP1.74□□□□□ -2.13
CCDC39-206ENST00000489868 J3QT63 122 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 CTSGP08311 255 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 HLA-GP17693 338 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 SLC6A1P30531 599 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 CLDN18P56856 261 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 MTPNP58546 118 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 TAS2R39P59534 338 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 ZNF181Q2M3W8 571 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 LYPD6Q86Y78 171 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 INO80EQ8NBZ0 244 aaPredicted RBP1.74□□□□□ -2.13
CCDC39-206ENST00000489868 PPP1R36Q96LQ0 422 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 EXO5Q9H790 373 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 KLF12Q9Y4X4 402 aa1.74□□□□□ -2.13
CCDC39-206ENST00000489868 SERTM2A0A1B0GWG4 89 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 HACD1B0YJ81 288 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 H3BN98 237 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 SMC2O95347 1197 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 IGHV3-53P01767 116 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 OR4Q2P0C623 313 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 CBR1P16152 277 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 DNAJC3Q13217 504 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 KATNAL2Q8IYT4 538 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 ZNF555Q8NEP9 628 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 TMEM234Q8WY98 164 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 ISOC2Q96AB3 205 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 SPACA5Q96QH8 159 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 CYP3A43Q9HB55 503 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 ABCB9Q9NP78 766 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 ZC4H2Q9NQZ6 224 aa1.73□□□□□ -2.13
CCDC39-206ENST00000489868 ZNF443Q9Y2A4 671 aaPredicted RBP1.73□□□□□ -2.13
CCDC39-206ENST00000489868 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
CCDC39-206ENST00000489868 TRAV8-4A0A0B4J246 113 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 WRBO00258 174 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 ISLRO14498 428 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 TRDMT1O14717 391 aaKnown RBP1.72□□□□□ -2.13
CCDC39-206ENST00000489868 OVOL1O14753 267 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 NDUFS5O43920 106 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 P01737 135 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 CLDN6P56747 220 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 TPBGQ13641 420 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 KCTD16Q68DU8 428 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 CLEC18BQ6UXF7 455 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 TCF24Q7RTU0 167 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 COMTD1Q86VU5 262 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 CMTM8Q8IZV2 173 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 OR5P3Q8WZ94 311 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 DDX19BQ9UMR2 479 aa1.72□□□□□ -2.13
CCDC39-206ENST00000489868 PHLPP2Q6ZVD8 1323 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 ZNF729A6NN14 1252 aaPredicted RBP1.71□□□□□ -2.14
CCDC39-206ENST00000489868 ARL2P36404 184 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 TRDNQ13061 729 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 ENDOGQ14249 297 aaKnown RBP1.71□□□□□ -2.14
CCDC39-206ENST00000489868 PCOTHQ58A44 107 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 TMPPEQ6ZT21 453 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 VTCN1Q7Z7D3 282 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 MICU2Q8IYU8 434 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 OR5H2Q8NGV7 314 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 OR10Z1Q8NGY1 313 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 OR8S1Q8NH09 359 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 SLC25A44Q96H78 314 aaPredicted RBP1.71□□□□□ -2.14
CCDC39-206ENST00000489868 C20orf166-AS1Q96NR2 134 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 MTG1Q9BT17 334 aaPredicted RBP1.71□□□□□ -2.14
CCDC39-206ENST00000489868 THTPAQ9BU02 230 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 KLF13Q9Y2Y9 288 aaPredicted RBP1.71□□□□□ -2.14
CCDC39-206ENST00000489868 ACOT9Q9Y305 439 aa1.71□□□□□ -2.14
CCDC39-206ENST00000489868 NPHP4O75161 1426 aaPredicted RBP1.71□□□□□ -2.14
CCDC39-206ENST00000489868 PLEKHG2Q9H7P9 1386 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 670.7 ms