RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 PRLHRP49683 370 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 ADIGQ0VDE8 80 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 STX4Q12846 297 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 MAPRE2Q15555 327 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 TTC32Q5I0X7 151 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 SAXO2Q658L1 398 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 EPGNQ6UW88 154 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 SHISA6Q6ZSJ9 500 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 COMTD1Q86VU5 262 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 LRRC8AQ8IWT6 810 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 UBALD2Q8IYN6 164 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 DRAM1Q8N682 238 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 TTLQ8NG68 377 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 OR4M2Q8NGB6 313 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 OR4M1Q8NGD0 313 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 OR9A2Q8NGT5 310 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 OR1L1Q8NH94 360 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 ANGPTL6Q8NI99 470 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 ZNF461Q8TAF7 563 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 IFT81Q8WYA0 676 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 GHSRQ92847 366 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 CPB2Q96IY4 423 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 RILPQ96NA2 401 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 CATSPER2Q96P56 530 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 CYTH2Q99418 400 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 C20orf144Q9BQM9 153 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 TMED9Q9BVK6 235 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 BEX2Q9BXY8 128 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 SLC38A1Q9H2H9 487 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 SPACA1Q9HBV2 294 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 C8orf17Q9NRJ1 99 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 TMEM100Q9NV29 134 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 NLE1Q9NVX2 485 aaPredicted RBP1.77□□□□□ -2.13
RFC4-213ENST00000489028 ZNHIT6Q9NWK9 470 aaKnown RBP1.77□□□□□ -2.13
RFC4-213ENST00000489028 NXT1Q9UKK6 140 aaKnown RBP1.77□□□□□ -2.13
RFC4-213ENST00000489028 LRRC42Q9Y546 428 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 BRWD3Q6RI45 1802 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 PTPRTO14522 1441 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 IGKV1-27A0A075B6S5 117 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 IGHV3-72A0A0B4J1Y9 119 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 CENPVL3A0A0U1RRI6 287 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 IQCF5A8MTL0 148 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 PLPP3O14495 311 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 NDUFS5O43920 106 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 CCDC22O60826 627 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 SCO1O75880 301 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 RCBTB2O95199 551 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 CD74P04233 296 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 RNASE2P10153 161 aaKnown RBP1.76□□□□□ -2.13
RFC4-213ENST00000489028 NQO2P16083 231 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 OPRK1P41145 380 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 CXCL12P48061 93 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 MAP3K7CLP57077 242 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 UBE2KP61086 200 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 IL5RAQ01344 420 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 GUSBP1Q15486 140 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 SLC25A35Q3KQZ1 300 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 TEX30Q5JUR7 227 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 ZNF684Q5T5D7 378 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 PRR9Q5T870 116 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 PDPK2PQ6A1A2 396 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 ZFP1Q6P2D0 407 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 UGT2A3Q6UWM9 527 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 ATPAF2Q8N5M1 289 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 ZNF645Q8N7E2 425 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 OR8G5Q8NG78 346 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 LINC01560Q8TB33 94 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 PDCD6IPQ8WUM4 868 aaKnown RBP1.76□□□□□ -2.13
RFC4-213ENST00000489028 NEURL3Q96EH8 262 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 L3HYPDHQ96EM0 354 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 ZFP3Q96NJ6 502 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 TRNT1Q96Q11 434 aaKnown RBP1.76□□□□□ -2.13
RFC4-213ENST00000489028 CHCHD7Q9BUK0 85 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 TBL1XR1Q9BZK7 514 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 METTL8Q9H825 291 aaKnown RBP1.76□□□□□ -2.13
RFC4-213ENST00000489028 PLEKHA1Q9HB21 404 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 TMBIM4Q9HC24 238 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 ABCB9Q9NP78 766 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 OR2S2Q9NQN1 319 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 MRM2Q9UI43 246 aaKnown RBP1.76□□□□□ -2.13
RFC4-213ENST00000489028 ANXA10Q9UJ72 324 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 PPIL1Q9Y3C6 166 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 RFNGQ9Y644 331 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 ENPP4Q9Y6X5 453 aa1.76□□□□□ -2.13
RFC4-213ENST00000489028 TUBGCP6Q96RT7 1819 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 USP42Q9H9J4 1324 aaKnown RBP1.75□□□□□ -2.13
RFC4-213ENST00000489028 IGHV3-49A0A0A0MS15 119 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 IGHV6-1A0A0B4J1U7 121 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 TRAV40A0A0B4J280 105 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 A0A1B0GTI1 187 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 C7orf66A4D0T2 115 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 C5orf63A6NC05 138 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 ZNF233A6NK53 670 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 F8VP50 259 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 RPL36A-HNRNPH2H7BZ11 118 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 ZNF207O43670 478 aaKnown RBP1.75□□□□□ -2.13
RFC4-213ENST00000489028 MPZL1O95297 269 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 CD8AP01732 235 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 HLA-GP17693 338 aa1.75□□□□□ -2.13
RFC4-213ENST00000489028 PAX6P26367 422 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms