RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 FUT6P51993 359 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 SEC61A1P61619 476 aaKnown RBP9.25□□□□□ -0.93
UBE4B-210ENST00000488228 LMO4P61968 165 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 SSX1Q16384 188 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 ZNF404Q494X3 552 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 TMEM155Q4W5P6 130 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 FAM27D1Q5T7N8 215 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 CRIP3Q6Q6R5 217 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 LRRC28Q86X40 367 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-210ENST00000488228 FAM90A1Q86YD7 464 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 ZNF573Q86YE8 665 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 SERPINA12Q8IW75 414 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 MUC20Q8N307 709 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-210ENST00000488228 SPICQ8N5J4 248 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 OR10Z1Q8NGY1 313 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 TMEM203Q969S6 136 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 SLAMF9Q96A28 289 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 DERL3Q96Q80 235 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 TMEM246Q9BRR3 403 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 GSX1Q9H4S2 264 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-210ENST00000488228 LPAR2Q9HBW0 351 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 TMEM165Q9HC07 324 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 SNTG1Q9NSN8 517 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 DSCAML1Q8TD84 2053 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 A0A1B0GW55 424 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 PIN1P1O15428 100 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 SPRY1O43609 319 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-210ENST00000488228 TNFAIP8O95379 198 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 LY6G6DO95868 133 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 LHBP01229 141 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 GYPAP02724 150 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 DUX4L2P0CJ85 424 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 DUX4L3P0CJ86 424 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 DUX4L4P0CJ87 422 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 DUX4L5P0CJ88 424 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 DUX4L6P0CJ89 424 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 DUX4L7P0CJ90 424 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 PGA5P0DJD9 388 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 FOSL1P15407 271 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 RPS2P15880 293 aaKnown RBP9.24□□□□□ -0.93
UBE4B-210ENST00000488228 CPEP16870 476 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 FSTP19883 344 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 RAB3AP20336 220 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 MPZP25189 248 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 MTCP1P56278 107 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 PPP3R1P63098 170 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 TPBGQ13641 420 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 NEDD8Q15843 81 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 ARMCX4Q5H9R4 360 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 UBE2UQ5VVX9 321 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 ZNF529Q6P280 563 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 DUX4L9Q6RFH8 374 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-210ENST00000488228 LYPD2Q6UXB3 125 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 LHFPL2Q6ZUX7 228 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 SLC25A26Q70HW3 274 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 Q71RC1 249 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-210ENST00000488228 PHC2Q8IXK0 858 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 POC1AQ8NBT0 407 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 DNAAF1Q8NEP3 725 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 OR5D14Q8NGL3 314 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 RAB39BQ96DA2 213 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 MSI2Q96DH6 328 aaKnown RBP9.24□□□□□ -0.93
UBE4B-210ENST00000488228 PKIBQ9C010 78 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 ISYNA1Q9NPH2 558 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 NOX4Q9NPH5 578 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 DUX4Q9UBX2 424 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 PCDHB10Q9UN67 800 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 FN1P02751 2386 aaKnown RBP9.24□□□□□ -0.93
UBE4B-210ENST00000488228 HIVEP2P31629 2446 aa9.24□□□□□ -0.93
UBE4B-210ENST00000488228 F5H0A9 414 aaPredicted RBP9.23□□□□□ -0.93
UBE4B-210ENST00000488228 F8VVB4 439 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 F8VWA3 439 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 ANGPTL7O43827 346 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 IGFBP3P17936 291 aaPredicted RBP9.23□□□□□ -0.93
UBE4B-210ENST00000488228 GLRA1P23415 457 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 CFHR2P36980 270 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 ATP1B3P54709 279 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 ACSM3Q53FZ2 586 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 DDI2Q5TDH0 399 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 TEX36Q5VZQ5 186 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 CLEC9AQ6UXN8 241 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 DCDC5Q6ZRR9 648 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 BIVMQ86UB2 503 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 FAM216BQ8N7L0 139 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 OR5T2Q8NGG2 359 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 OR52N4Q8NGI2 321 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 FCGR1BQ92637 280 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 NRIP2Q9BQI9 281 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 ZNF696Q9H7X3 374 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 PATZ1Q9HBE1 687 aaKnown RBP9.23□□□□□ -0.93
UBE4B-210ENST00000488228 NEK6Q9HC98 313 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 NDUFB11Q9NX14 153 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 CTSZQ9UBR2 303 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 CKLFQ9UBR5 152 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 DNAJB11Q9UBS4 358 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 POLDIP2Q9Y2S7 368 aa9.23□□□□□ -0.93
UBE4B-210ENST00000488228 TRAV38-1A0A0B4J264 116 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 IGKV1-12A0A0C4DH73 117 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 GABRPO00591 440 aa9.22□□□□□ -0.93
UBE4B-210ENST00000488228 PHF1O43189 567 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms