RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 IL17RELQ6ZVW7 336 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 UTS2BQ765I0 119 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 SPARTQ8N0X7 666 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 PARP16Q8N5Y8 322 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 CCDC54Q8NEL0 328 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 TMEM203Q969S6 136 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 C1orf159Q96HA4 380 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 PPIL3Q9H2H8 161 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 SMURF1Q9HCE7 757 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 ACOT13Q9NPJ3 140 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 MTCH1Q9NZJ7 389 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 IL36RNQ9UBH0 155 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 METRNQ9UJH8 293 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 SLC7A11Q9UPY5 501 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 LRRC42Q9Y546 428 aa14.31□□□□□ -0.12
SHROOM1-205ENST00000488072 ARHGAP32A7KAX9 2087 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 IGKV1-12A0A0C4DH73 117 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 INAFM1C9JVW0 142 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 J3QT63 122 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 IFNL4K9M1U5 179 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 GATBO75879 557 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 SERPINA3P01011 423 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 IGKV1D-12P01611 117 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 HEXAP06865 529 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 ZNF12P17014 697 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 NPBWR2P48146 333 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 FUT6P51993 359 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 ACSM1Q08AH1 577 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 TMEM155Q4W5P6 130 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 SLC25A26Q70HW3 274 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 C1QL2Q7Z5L3 287 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 C1orf87Q8N0U7 546 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 FAM216BQ8N7L0 139 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 OR52N4Q8NGI2 321 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 PP6455Q8WZ26 134 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 TMEM106AQ96A25 262 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 BORCS8Q96FH0 119 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 MMP26Q9NRE1 261 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 PCDHB10Q9UN67 800 aa14.3□□□□□ -0.12
SHROOM1-205ENST00000488072 TRBV5-7A0A0A0MS05 114 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 KIAA1324LA8MWY0 1029 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 TRAPPC2LH3BP13 241 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 PGA5P0DJD9 388 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 RPS2P15880 293 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 PCMT1P22061 227 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 GLRA1P23415 457 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 GZMKP49863 264 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 MTCP1P56278 107 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 TAS2R43P59537 309 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 GABARAPL2P60520 117 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 CNN3Q15417 329 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 SSX1Q16384 188 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 TEX36Q5VZQ5 186 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 ZNF529Q6P280 563 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 ZNF841Q6ZN19 808 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 ZNF573Q86YE8 665 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 SERPINA12Q8IW75 414 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 LINC01356Q8N9X3 169 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 OR10Z1Q8NGY1 313 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 C10orf35Q96D05 121 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 NOX4Q9NPH5 578 aa14.29□□□□□ -0.12
SHROOM1-205ENST00000488072 ZNF879B4DU55 563 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 ADAM20O43506 726 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 SULT1B1O43704 296 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 FN1P02751 2386 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 HCKP08631 526 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 BCL3P20749 454 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 MPZP25189 248 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 CFHR2P36980 270 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 SNU13P55769 128 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 Q499Y3 187 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 YIF1BQ5BJH7 314 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 METAP1DQ6UB28 335 aaPredicted RBP14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 SPICQ8N5J4 248 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 POC1AQ8NBT0 407 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 HAVCR2Q8TDQ0 301 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 ITFG2Q969R8 447 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 DERL3Q96Q80 235 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 MGLLQ99685 303 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 BLOC1S6Q9UL45 172 aa14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 SF3B6Q9Y3B4 125 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-205ENST00000488072 MALRD1Q5VYJ5 2156 aa14.27□□□□□ -0.12
SHROOM1-205ENST00000488072 IGKV1D-17A0A075B6S4 117 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 AVPP01185 164 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 PSG2P11465 335 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 IGFBP3P17936 291 aaPredicted RBP14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 RBP2P50120 134 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 ATP1B3P54709 279 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 ZP1P60852 638 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 BDH1Q02338 343 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 TPBGQ13641 420 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 TBCEQ15813 527 aaPredicted RBP14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 ACSM3Q53FZ2 586 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 ARMCX4Q5H9R4 360 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 STUMQ69YW2 141 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 ACP7Q6ZNF0 438 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 TMEM91Q6ZNR0 172 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 SATL1Q86VE3 508 aa14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 MUC20Q8N307 709 aaPredicted RBP14.27□□□□□ -0.13
SHROOM1-205ENST00000488072 CD177Q8N6Q3 437 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms