RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, human

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HFM1-208	ENST00000488023	RPS12	P25398	132 aa	Known RBP	2.59	□□□□□ -2
HFM1-208	ENST00000488023	POLR2I	P36954	125 aa	Known RBP	2.59	□□□□□ -2
HFM1-208	ENST00000488023	CAPZB	P47756	277 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	GDI2	P50395	445 aa	Known RBP	2.59	□□□□□ -2
HFM1-208	ENST00000488023	P2RY4	P51582	365 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	KRTAP10-3	P60369	221 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	UBE2N	P61088	152 aa	Known RBP	2.59	□□□□□ -2
HFM1-208	ENST00000488023	LSM6	P62312	80 aa	Known RBP	2.59	□□□□□ -2
HFM1-208	ENST00000488023	GLO1	Q04760	184 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	HERPUD1	Q15011	391 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	TOMM34	Q15785	309 aa	Predicted RBP	2.59	□□□□□ -2
HFM1-208	ENST00000488023	HLA-DRB5	Q30154	266 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	C6orf99	Q4VX62	202 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	ACSM3	Q53FZ2	586 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	ZC2HC1B	Q5TFG8	222 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	DNM1P34	Q6PK57	102 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	STX12	Q86Y82	276 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	C10orf67	Q8IYJ2	551 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	CCNYL1	Q8N7R7	359 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	RERG	Q96A58	199 aa	Predicted RBP	2.59	□□□□□ -2
HFM1-208	ENST00000488023	NTAN1	Q96AB6	310 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	PPWD1	Q96BP3	646 aa	Known RBP	2.59	□□□□□ -2
HFM1-208	ENST00000488023	SEH1L	Q96EE3	360 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	WFIKKN1	Q96NZ8	548 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	SPACA5	Q96QH8	159 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	TRIM45	Q9H8W5	580 aa	Predicted RBP	2.59	□□□□□ -2
HFM1-208	ENST00000488023	HEBP1	Q9NRV9	189 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	DNAJC27	Q9NZQ0	273 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	DEC1	Q9P2X7	70 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	RAB22A	Q9UL26	194 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023	MRC2	Q9UBG0	1479 aa		2.59	□□□□□ -2
HFM1-208	ENST00000488023		A0A1W2PRG6	482 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	UBD	O15205	165 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	SUPT3H	O75486	399 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	APOE	P02649	317 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	TCRB	P04435	133 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	C8orf88	P0DMB2	117 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	CCNE1	P24864	410 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	IFNGR2	P38484	337 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	CXCR4	P61073	352 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	ERVS71-1	P61550	626 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	DR1	Q01658	176 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	PRDX1	Q06830	199 aa	Known RBP	2.58	□□□□□ -2
HFM1-208	ENST00000488023	LAMTOR4	Q0VGL1	99 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	NAB1	Q13506	487 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023		Q1RN00	199 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	OGFRL1	Q5TC84	451 aa	Predicted RBP	2.58	□□□□□ -2
HFM1-208	ENST00000488023	MARC1	Q5VT66	337 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	LPCAT4	Q643R3	524 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	CEMP1	Q6PRD7	247 aa	Predicted RBP	2.58	□□□□□ -2
HFM1-208	ENST00000488023	METTL7B	Q6UX53	244 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	FAM92B	Q6ZTR7	304 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	POM121L12	Q8N7R1	296 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	C20orf203	Q8NBC4	194 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	UBAC2	Q8NBM4	344 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	RXFP4	Q8TDU9	374 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	CASTOR1	Q8WTX7	329 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	C22orf15	Q8WYQ4	148 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	TESC	Q96BS2	214 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	DCPS	Q96C86	337 aa	Known RBP	2.58	□□□□□ -2
HFM1-208	ENST00000488023	MAGEB18	Q96M61	343 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	NRIP2	Q9BQI9	281 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	TMEM243	Q9BU79	118 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	OR51B6	Q9H340	312 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	RBM22	Q9NW64	420 aa	Known RBP eCLIP	2.58	□□□□□ -2	2e-8	■■■□□ 16.6
HFM1-208	ENST00000488023	TP53TG1	Q9Y2A0	90 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	ALG5	Q9Y673	324 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	PALLD	Q8WX93	1383 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	RAB3GAP2	Q9H2M9	1393 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023	LAMC3	Q9Y6N6	1575 aa		2.58	□□□□□ -2
HFM1-208	ENST00000488023		A0A1B0GXF2	115 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	DAPL1	A0PJW8	107 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	PLAC8L1	A1L4L8	177 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023		M0R036	132 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	ENTPD6	O75354	484 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	SLC22A5	O76082	557 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	CDK1	P06493	297 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	G0S2	P27469	103 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	GCLM	P48507	274 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	TTPA	P49638	278 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	ACOT2	P49753	483 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	TAF6	P49848	677 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	MEOX2	P50222	304 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	PPOX	P50336	477 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	RPL23	P62829	140 aa	Known RBP	2.57	□□□□□ -2
HFM1-208	ENST00000488023	MRPS25	P82663	173 aa	Known RBP	2.57	□□□□□ -2
HFM1-208	ENST00000488023	AES	Q08117	197 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	RSPO1	Q2MKA7	263 aa	Predicted RBP	2.57	□□□□□ -2
HFM1-208	ENST00000488023	SLC25A35	Q3KQZ1	300 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	SMUG1	Q53HV7	270 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	SPIN4	Q56A73	249 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	HES5	Q5TA89	166 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	KCTD16	Q68DU8	428 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	S100A7A	Q86SG5	101 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	CPNE9	Q8IYJ1	553 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	NPB	Q8NG41	125 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	ERMN	Q8TAM6	284 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	PIGX	Q8TBF5	258 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	GHSR	Q92847	366 aa		2.57	□□□□□ -2
HFM1-208	ENST00000488023	RAB8B	Q92930	207 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms