RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ZNF107Q9UII5 783 aaPredicted RBP6.06□□□□□ -1.44
SF3A3-206ENST00000487062 GPR160Q9UJ42 338 aa6.06□□□□□ -1.44
SF3A3-206ENST00000487062 SH3BGRL2Q9UJC5 107 aa6.06□□□□□ -1.44
SF3A3-206ENST00000487062 TINAGQ9UJW2 476 aa6.06□□□□□ -1.44
SF3A3-206ENST00000487062 ITGB1BP2Q9UKP3 347 aa6.06□□□□□ -1.44
SF3A3-206ENST00000487062 NUBP2Q9Y5Y2 271 aa6.06□□□□□ -1.44
SF3A3-206ENST00000487062 ANKRD11Q6UB99 2663 aaPredicted RBP6.06□□□□□ -1.44
SF3A3-206ENST00000487062 IGKV1-27A0A075B6S5 117 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 IGHV2OR16-5A0A0B4J2B6 119 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 TRGV8A0A0C4DH27 118 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 IGHV1-18A0A0C4DH31 117 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.05□□□□□ -1.44
SF3A3-206ENST00000487062 PQLC2LA1A4F0 135 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 MEIOCA2RUB1 952 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 TMEM235A6NFC5 223 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 IQCF6A8MYZ5 107 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 ZNF732B4DXR9 585 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 C16orf97H3BN30 126 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 H3BUI4 141 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 M0R1B8 84 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 SPRY1O43609 319 aaPredicted RBP6.05□□□□□ -1.44
SF3A3-206ENST00000487062 SSX4O60224 188 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 PLATP00750 562 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 CRYAAP02489 173 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 AKAIN1P0CW23 69 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 PTHLHP12272 177 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 RCVRNP35243 200 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 CBX5P45973 191 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 TAS2R19P59542 299 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 GNG2P59768 71 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 RPS23P62266 143 aaKnown RBP6.05□□□□□ -1.44
SF3A3-206ENST00000487062 GNG3P63215 75 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 ARFRP1Q13795 201 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 ZNF718Q3SXZ3 478 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 MOGAT2Q3SYC2 334 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 SPATA46Q5T0L3 261 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 C1QL2Q7Z5L3 287 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 MYPOPQ86VE0 399 aaPredicted RBP6.05□□□□□ -1.44
SF3A3-206ENST00000487062 LIX1LQ8IVB5 337 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 OSR2Q8N2R0 312 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 FAM89BQ8N5H3 189 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 ZNF611Q8N823 705 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 TMEM229BQ8NBD8 167 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 BHLHE23Q8NDY6 225 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 OR10K1Q8NGX5 313 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 OR8S1Q8NH09 359 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 OR51F2Q8NH61 342 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 AQP3Q92482 292 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 S100PBPQ96BU1 408 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 SEH1LQ96EE3 360 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 CCDC120Q96HB5 630 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 RNF170Q96K19 258 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 MICU1Q9BPX6 476 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 MARVELD1Q9BSK0 173 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 RTL8AQ9BWD3 113 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 ACTR6Q9GZN1 396 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 MMP28Q9H239 520 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 HRASLSQ9HDD0 168 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 IFT46Q9NQC8 304 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.05□□□□□ -1.44
SF3A3-206ENST00000487062 NKIRAS2Q9NYR9 191 aa6.05□□□□□ -1.44
SF3A3-206ENST00000487062 HEATR1Q9H583 2144 aaKnown RBP6.04□□□□□ -1.44
SF3A3-206ENST00000487062 SPTBN4Q9H254 2564 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 A0A0A6YYD4 124 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 A0A1W2PP11 408 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 MEIS3P1A6NDR6 274 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 SERPINE3A8MV23 424 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PRSS44E7EML9 344 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 INMT-MINDY4F8WBC2 141 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 TRAPPC2LH3BP13 241 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 SOCS1O15524 211 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 AKR7A2O43488 359 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 ANGPTL7O43827 346 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 CA11O75493 328 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 MT-ND4P03905 459 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 TCRBP04435 133 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PPP3CBP16298 524 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 HIST1H1DP16402 221 aaKnown RBP6.04□□□□□ -1.44
SF3A3-206ENST00000487062 GNB3P16520 340 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 CA6P23280 308 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 GABRR1P24046 479 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 GIFP27352 417 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 BLVRBP30043 206 aaPredicted RBP6.04□□□□□ -1.44
SF3A3-206ENST00000487062 CA7P43166 264 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 HAAOP46952 286 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 ZNF83P51522 516 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 GPM6AP51674 278 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 RAG2P55895 527 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 BTG1P62324 171 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 MRPS15P82914 257 aaKnown RBP6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PRR20EP86478 221 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PRR20CP86479 221 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PRR20DP86480 221 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PRR20BP86481 221 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PRR20AP86496 221 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 NAAAQ02083 359 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 MZT1Q08AG7 82 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 OR8G1Q15617 311 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 PLA1AQ53H76 456 aa6.04□□□□□ -1.44
SF3A3-206ENST00000487062 AGAP6Q5VW22 663 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms