RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 IGHV3-15A0A0B4J1V0 119 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 NPIPA5A0A0B4J1W7 369 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 FAM25AB3EWG3 89 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 FAM25CB3EWG5 89 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 FAM25GB3EWG6 89 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 FAM157AC9JC47 383 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 LOC110117498-PIK3R3F6TDL0 507 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 TSTD3H0UI37 97 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 CLDN34H7C241 214 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 M0QXV9 152 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 M0QYG6 137 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 BHLHE40O14503 412 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 SYNGR3O43761 229 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 KCNK2O95069 426 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 TXNDC12O95881 172 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 HOXB5P09067 269 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 ANXA3P12429 323 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 LYL1P12980 280 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 B4GALT1P15291 398 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 NPR2P20594 1047 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 ERP29P30040 261 aaKnown RBP5.8□□□□□ -1.48
HDAC3-209ENST00000486618 CALCRP30988 508 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 HSD17B3P37058 310 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 SOX2P48431 317 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 IDH3GP51553 393 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-209ENST00000486618 DVL1P1P54792 670 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-209ENST00000486618 RPL19P84098 196 aaKnown RBP5.8□□□□□ -1.48
HDAC3-209ENST00000486618 DHODHQ02127 395 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 TGFBR3Q03167 851 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 PUDPQ08623 228 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 GABRA6Q16445 453 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 MST1LQ2TV78 715 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 TNFAIP8L3Q5GJ75 292 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 SERTAD4-AS1Q5TG53 156 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 LPCAT4Q643R3 524 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 FAM71E1Q6IPT2 247 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 ACSM6Q6P461 480 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 DNM1P34Q6PK57 102 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 CD164L2Q6UWJ8 174 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 TMPRSS11AQ6ZMR5 421 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 RPS27LQ71UM5 84 aaKnown RBP5.8□□□□□ -1.48
HDAC3-209ENST00000486618 S100A7AQ86SG5 101 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 TBC1D26Q86UD7 250 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 GPAT4Q86UL3 456 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 SATL1Q86VE3 508 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 ADGRG3Q86Y34 549 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 COX18Q8N8Q8 333 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 HSD17B11Q8NBQ5 300 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 FBXO25Q8TCJ0 367 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 ZHX1-C8orf76Q96EF9 292 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 NOL4LQ96MY1 436 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-209ENST00000486618 HIST1H2AAQ96QV6 131 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 OR2V2Q96R30 315 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF300Q96RE9 604 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-209ENST00000486618 SEPHS2Q99611 448 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 MND1Q9BWT6 205 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 C1QTNF6Q9BXI9 259 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 EBPLQ9BY08 206 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 PPIL3Q9H2H8 161 aaKnown RBP5.8□□□□□ -1.48
HDAC3-209ENST00000486618 METTL17Q9H7H0 456 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-209ENST00000486618 RAB18Q9NP72 206 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 C1orf109Q9NX04 203 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 IKZF2Q9UKS7 526 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 NDRG4Q9ULP0 352 aaKnown RBP5.8□□□□□ -1.48
HDAC3-209ENST00000486618 MEGF8Q7Z7M0 2845 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 IGKV3D-15A0A087WSY6 115 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 EXOC1LA0A1B0GW35 172 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 A0A1W2PR80 420 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 LRP5LA4QPB2 252 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 A8MT66 165 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 SULT2B1O00204 365 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 MAGEB4O15481 346 aaPredicted RBP5.79□□□□□ -1.48
HDAC3-209ENST00000486618 MRPL33O75394 65 aaKnown RBP5.79□□□□□ -1.48
HDAC3-209ENST00000486618 TOX4O94842 621 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 IFNGP01579 166 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 IGHV3-9P01782 118 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 IGHV2-70P01814 119 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 CDK1P06493 297 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 SFTPBP07988 381 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 TACSTD2P09758 323 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 H2AFXP16104 143 aaPredicted RBP5.79□□□□□ -1.48
HDAC3-209ENST00000486618 EDNRAP25101 427 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 RAP2BP61225 183 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 IL13RA1P78552 427 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 GUCY2DQ02846 1103 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF117Q03924 483 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 FHL3Q13643 280 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 CD226Q15762 336 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 TNXAQ16473 311 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 MRPL23Q16540 153 aaKnown RBP5.79□□□□□ -1.48
HDAC3-209ENST00000486618 ZSWIM7Q19AV6 140 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 RBMS3Q6XE24 437 aaKnown RBP5.79□□□□□ -1.48
HDAC3-209ENST00000486618 HACD2Q6Y1H2 254 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 TMPPEQ6ZT21 453 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF572Q7Z3I7 529 aaPredicted RBP5.79□□□□□ -1.48
HDAC3-209ENST00000486618 GLCCI1Q86VQ1 547 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 PTOV1Q86YD1 416 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 NRMQ8IXM6 262 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 TEX29Q8N6K0 151 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 INO80EQ8NBZ0 244 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms