RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 LINC00471Q8N535 108 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 C11orf42Q8N5U0 333 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 CYB561A3Q8NBI2 242 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 ZNRF1Q8ND25 227 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 PROKR2Q8NFJ6 384 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 HPSE2Q8WWQ2 592 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 SGK3Q96BR1 496 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 RCN3Q96D15 328 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 REEP6Q96HR9 211 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 DDOQ99489 341 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 SIKE1Q9BRV8 207 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 IFT27Q9BW83 186 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 PAPOLGQ9BWT3 736 aaKnown RBP4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 CDCA4Q9BXL8 241 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 DNTTIP1Q9H147 329 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 OPA3Q9H6K4 179 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 RAB18Q9NP72 206 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 SAR1AQ9NR31 198 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 C19orf12Q9NSK7 152 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 CENPMQ9NSP4 180 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 INTS9Q9NV88 658 aaKnown RBP4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 KCNG2Q9UJ96 466 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 ZNF222Q9UK12 451 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 TCF19Q9Y242 345 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 NOTCH3Q9UM47 2321 aa4.8□□□□□ -1.64
NECTIN3-208ENST00000486596 EPPK1P58107 5090 aaKnown RBP4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 A6NDX4 124 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 OR2AT4A6NND4 320 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 ZNF878C9JN71 531 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 TIPRLO75663 272 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 SPDEFO95238 335 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 GYPBP06028 91 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 ANXA2P07355 339 aaKnown RBP4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 ACAA1P09110 424 aaPredicted RBP4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 CLUP10909 449 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 CCL3L1P16619 93 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 RHCEP18577 417 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 ACKR3P25106 362 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 POU1F1P28069 291 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 HOXD3P31249 432 aaPredicted RBP4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 DCTDP32321 178 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 DDOSTP39656 456 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 NAA10P41227 235 aaPredicted RBP4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 GABRA2P47869 451 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 CX3CR1P49238 355 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 GSK3BP49841 420 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 BLCAPP62952 87 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 BLMHQ13867 455 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 ZNF273Q14593 569 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 MAPRE2Q15555 327 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 TIGD6Q17RP2 521 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 GFOD2Q3B7J2 385 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 DEFB121Q5J5C9 76 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 TCTEX1D4Q5JR98 221 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 CGB2Q6NT52 195 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 C8orf82Q6P1X6 216 aaPredicted RBP4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 ZNF782Q6ZMW2 699 aaPredicted RBP4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 FAM57BQ71RH2 274 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 PRSS45Q7RTY3 260 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 PAPD5Q8NDF8 572 aaKnown RBP4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 TMEM185AQ8NFB2 350 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 OR5D13Q8NGL4 314 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 OR4C15Q8NGM1 316 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 OR10Z1Q8NGY1 313 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 FAM162AQ96A26 154 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 C7orf34Q96L11 122 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 MUC13Q9H3R2 512 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 EGLN3Q9H6Z9 239 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 SP140LQ9H930 580 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 KRCC1Q9NPI7 259 aaPredicted RBP4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 GID8Q9NWU2 228 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 DNAJC27Q9NZQ0 273 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 NLKQ9UBE8 527 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 V9GYQ6 96 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 RYR2Q92736 4967 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 COL7A1Q02388 2944 aa4.79□□□□□ -1.64
NECTIN3-208ENST00000486596 DHRS12A0PJE2 317 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 FAM90A8PA6NJQ4 464 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 ANXA2P2A6NMY6 339 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 ZNF850A8MQ14 1090 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 VGLL3A8MV65 326 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 SEMG1P04279 462 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 PF4V1P10720 104 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 PSG2P11465 335 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 GLRA1P23415 457 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 GNALP38405 381 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 GSSP48637 474 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 CEBPDP49716 269 aaPredicted RBP4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 ENTPD1P49961 510 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 ZNF121P58317 390 aaPredicted RBP4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 IL5RAQ01344 420 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 SPIBQ01892 262 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 EGFEM1PQ0D2K5 195 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 PRDX4Q13162 271 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 CRMP1Q14194 572 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 CNN3Q15417 329 aaKnown RBP4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 TAF13Q15543 124 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 DMRTC1Q5HYR2 192 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 LINC01590Q5TEZ4 76 aa4.78□□□□□ -1.64
NECTIN3-208ENST00000486596 CCDC121Q6ZUS5 278 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms