RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PITPNBP48739 271 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 ATP1B3P54709 279 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 LCN2P80188 198 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 BDH1Q02338 343 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 SPHARQ15513 63 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 MICBQ29980 383 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 ESCO2Q56NI9 601 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 TEX36Q5VZQ5 186 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 NLRC3Q7RTR2 1065 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 CALHM1Q8IU99 346 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 OR5T2Q8NGG2 359 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 OR8B3Q8NGG8 313 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 OR5D14Q8NGL3 314 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 TMEM106AQ96A25 262 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 RFT1Q96AA3 541 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 ORAI1Q96D31 301 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 PGLYRP3Q96LB9 341 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 OPALINQ96PE5 141 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 SPACA5Q96QH8 159 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 OR8B2Q96RD0 313 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 TAS2R4Q9NYW5 299 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 POLDIP2Q9Y2S7 368 aa9.9□□□□□ -0.82
HPS4-214ENST00000485842 HIVEP2P31629 2446 aa9.9□□□□□ -0.83
HPS4-214ENST00000485842 TRBV5-5A0A0J9YX44 114 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 PHF1O43189 567 aaPredicted RBP9.89□□□□□ -0.83
HPS4-214ENST00000485842 SULT1B1O43704 296 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 TFF1P04155 84 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 WNT2P09544 360 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 MUC1P15941 1255 aaPredicted RBP9.89□□□□□ -0.83
HPS4-214ENST00000485842 RBP2P50120 134 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 DVL1P1P54792 670 aaPredicted RBP9.89□□□□□ -0.83
HPS4-214ENST00000485842 MTCP1P56278 107 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 GABARAPL2P60520 117 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 GNB2P62879 340 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 Q499Y3 187 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 YIF1BQ5BJH7 314 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 LHFPL2Q6ZUX7 228 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 SLC25A26Q70HW3 274 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 SERPINA12Q8IW75 414 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 PARP16Q8N5Y8 322 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 POC1AQ8NBT0 407 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 DNAAF1Q8NEP3 725 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 SLAMF9Q96A28 289 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 TMEM186Q96B77 213 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 SPSB1Q96BD6 273 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 TMIGD2Q96BF3 282 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 OR14A2Q96R54 314 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 CCL13Q99616 98 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 PKIBQ9C010 78 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 NEK6Q9HC98 313 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 HIF1ANQ9NWT6 349 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 NLKQ9UBE8 527 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 CTSZQ9UBR2 303 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 LRCH1Q9Y2L9 728 aa9.89□□□□□ -0.83
HPS4-214ENST00000485842 ARHGAP32A7KAX9 2087 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 TRAV20A0A0B4J274 112 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 NKX6-3A6NJ46 265 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 SPRY1O43609 319 aaPredicted RBP9.88□□□□□ -0.83
HPS4-214ENST00000485842 NDUFA2O43678 99 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 FOXH1O75593 365 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 NXPH2O95156 264 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 PGA5P0DJD9 388 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 RAB3AP20336 220 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 MPZP25189 248 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 ZFP36P26651 326 aaKnown RBP9.88□□□□□ -0.83
HPS4-214ENST00000485842 RPS11P62280 158 aaKnown RBP eCLIP9.88□□□□□ -0.83
HPS4-214ENST00000485842 ACSM1Q08AH1 577 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 IL24Q13007 206 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 TBCEQ15813 527 aaPredicted RBP9.88□□□□□ -0.83
HPS4-214ENST00000485842 SMIM21Q3B7S5 101 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 LIPKQ5VXJ0 399 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 STUMQ69YW2 141 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 ACP7Q6ZNF0 438 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 RNF144BQ7Z419 303 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 OR51A2Q8NGJ7 313 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 OR5D18Q8NGL1 313 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 UFD1Q92890 307 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 TMED9Q9BVK6 235 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 SSBP3Q9BWW4 388 aaPredicted RBP9.88□□□□□ -0.83
HPS4-214ENST00000485842 CLN8Q9UBY8 286 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 OR5V1Q9UGF6 321 aa9.88□□□□□ -0.83
HPS4-214ENST00000485842 SONP18583 2426 aaKnown RBP9.87□□□□□ -0.83
HPS4-214ENST00000485842 A0A1B0GW55 424 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 A0A1W2PPK0 400 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 OR2AT4A6NND4 320 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 KIAA1324LA8MWY0 1029 aaPredicted RBP9.87□□□□□ -0.83
HPS4-214ENST00000485842 TMPRSS2O15393 492 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 CYB5AP00167 134 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 DUX4L2P0CJ85 424 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 DUX4L3P0CJ86 424 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 DUX4L4P0CJ87 422 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 DUX4L5P0CJ88 424 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 DUX4L6P0CJ89 424 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 DUX4L7P0CJ90 424 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 GABRA2P47869 451 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 PPP3R1P63098 170 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 IKZF1Q13422 519 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 CR1LQ2VPA4 569 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 ASPHD2Q6ICH7 369 aa9.87□□□□□ -0.83
HPS4-214ENST00000485842 DUX4L9Q6RFH8 374 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms