RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 PDK4Q16654 411 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 CYP51A1Q16850 503 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 DEFB121Q5J5C9 76 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 DCST2Q5T1A1 773 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 CPTPQ5TA50 214 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 TSPO2Q5TGU0 170 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 SAXO2Q658L1 398 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 SLC48A1Q6P1K1 146 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 MED27Q6P2C8 311 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 SYT10Q6XYQ8 523 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 MUC7Q8TAX7 377 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 FBXO30Q8TB52 745 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 APH1AQ96BI3 265 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 CMTM7Q96FZ5 175 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 MYCBPQ99417 103 aaPredicted RBP2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 B9D2Q9BPU9 175 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 NICN1Q9BSH3 213 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 EFCAB11Q9BUY7 163 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 MS4A12Q9NXJ0 267 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 TAS2R13Q9NYV9 303 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 CHMP5Q9NZZ3 219 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 MAD1L1Q9Y6D9 718 aa2.82□□□□□ -1.96
SMARCC1-207ENST00000485833 HERC1Q15751 4861 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 A0A1B0GUS0 222 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 DHRS7CA6NNS2 312 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 BCAS1O75363 584 aaPredicted RBP2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 STK16O75716 305 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 PSMG1O95456 288 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 OXSR1O95747 527 aaPredicted RBP2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 LGI1O95970 557 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 CD80P33681 288 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 MAGEA4P43358 317 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 TAS2R39P59534 338 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 SSTP61278 116 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 ERVS71-1P61550 626 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 CCL8P80075 99 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 ZNF117Q03924 483 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 BIKQ13323 160 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 CCNJQ5T5M9 372 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 SULT1C3Q6IMI6 304 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 UGT2A3Q6UWM9 527 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 CASP12Q6UXS9 341 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 HACD2Q6Y1H2 254 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 PPP1R27Q86WC6 154 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 ZNF675Q8TD23 568 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 SRSF12Q8WXF0 261 aaKnown RBP2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 RDH5Q92781 318 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 RAB8BQ92930 207 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 POP5Q969H6 163 aaKnown RBP2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 EXOSC8Q96B26 276 aaKnown RBP2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 TM4SF18Q96CE8 201 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 ARL5BQ96KC2 179 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 TBL1XR1Q9BZK7 514 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 OR51J1Q9H342 316 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 ZNF442Q9H7R0 627 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 CAB39LQ9H9S4 337 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 FN3KRPQ9HA64 309 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 FARSBQ9NSD9 589 aaKnown RBP2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 ANO10Q9NW15 660 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 PAQR5Q9NXK6 330 aaPredicted RBP2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 UBAP1Q9NZ09 502 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 BLOC1S6Q9UL45 172 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 RAB26Q9ULW5 256 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 NOSIPQ9Y314 301 aaKnown RBP2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 RNF11Q9Y3C5 154 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 OR10H1Q9Y4A9 318 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 INSIG2Q9Y5U4 225 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 UBR4Q5T4S7 5183 aa2.81□□□□□ -1.96
SMARCC1-207ENST00000485833 PLECQ15149 4684 aaKnown RBP2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 HECTD4Q9Y4D8 3996 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 A0A087WZY1 265 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 ZNF816-ZNF321PA0A0X1KG74 233 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 E9PLD3 99 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 M0R233 179 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 UBXN8O00124 270 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 UPK1AO00322 258 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 PFDN6O15212 129 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 MAGEB4O15481 346 aaPredicted RBP2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 CRYBA1P05813 215 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 ALOX5P09917 674 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 PABPC4LP0CB38 370 aaKnown RBP2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 CSNK2A2P19784 350 aaPredicted RBP2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 ME2P23368 584 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 GABRA3P34903 492 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 MAGEA1P43355 309 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 MAGEA3P43357 314 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 HNMTP50135 292 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 TMEM33P57088 247 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 PRPS1P60891 318 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 MRPS22P82650 360 aaKnown RBP2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 PPP1R8Q12972 351 aaKnown RBP2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 MPPED2Q15777 294 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 NSUN5P1Q3KNT7 163 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 BEND6Q5SZJ8 279 aaPredicted RBP2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 TMEM107Q6UX40 140 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 DLEU7Q6UYE1 221 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 RPS27LQ71UM5 84 aaKnown RBP2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 OLIG3Q7RTU3 272 aa2.8□□□□□ -1.96
SMARCC1-207ENST00000485833 COMMD6Q7Z4G1 85 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms