RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 BTNL2Q9UIR0 455 aa4.52□□□□□ -1.69
CCDC39-205ENST00000485055 C14orf166Q9Y224 244 aaKnown RBP4.52□□□□□ -1.69
CCDC39-205ENST00000485055 DNAJC15Q9Y5T4 150 aa4.52□□□□□ -1.69
CCDC39-205ENST00000485055 IGKV3D-15A0A087WSY6 115 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 TGIF2-C20orf24A0A0A6YYL0 155 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 A0A0G2JN53 185 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF724A8MTY0 619 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 H3BNH8 94 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 EIF3GO75821 320 aaKnown RBP eCLIP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 PIAS1O75925 651 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SUPT7LO94864 414 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 HLA-DQA2P01906 255 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 BPGMP07738 259 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 IL6RP08887 468 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SDC1P18827 310 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GZMHP20718 246 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SOX2P48431 317 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 FUT6P51993 359 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 PLCXD2Q0VAA5 305 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 MED21Q13503 144 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF385BQ569K4 471 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GGNQ86UU5 652 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 TMEM17Q86X19 198 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 OR4N5Q8IXE1 308 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 PRR26Q8N8Z3 221 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 LRTM2Q8N967 370 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 ATP6V1C2Q8NEY4 427 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 OR11H4Q8NGC9 324 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 OR10K1Q8NGX5 313 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 OR6K3Q8NGY3 331 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 RNASE11Q8TAA1 199 aaKnown RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 EXOSC8Q96B26 276 aaKnown RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 DOHHQ9BU89 302 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GATA5Q9BWX5 397 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 ACTR6Q9GZN1 396 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 DEFB127Q9H1M4 99 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 PAK1IP1Q9NWT1 392 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 ZDHHC2Q9UIJ5 367 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 FKBP7Q9Y680 259 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 FAM229AH3BQW9 127 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 COPEO14579 308 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 KNG1P01042 644 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SERPINA5P05154 406 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 LINC00614P0C842 121 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 ACP2P11117 423 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 ARSBP15848 533 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GRPRP30550 384 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GPX4P36969 197 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 PMELP40967 661 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GLP1RP43220 463 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 RPL5P46777 297 aaKnown RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 IDH3GP51553 393 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 XGP55808 180 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 HSF1Q00613 529 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 ARHGAP11BQ3KRB8 267 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 ACTL10Q5JWF8 245 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 CPTPQ5TA50 214 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 DRAM2Q6UX65 266 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 HACD2Q6Y1H2 254 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GCSAMQ8N6F7 178 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 OR2T11Q8NH01 316 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 UPRTQ96BW1 309 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GMPPAQ96IJ6 420 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SYT4Q9H2B2 425 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 PPA2Q9H2U2 334 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 B3GAT2Q9NPZ5 323 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 UBQLN4Q9NRR5 601 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GHRLQ9UBU3 117 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 CACNA1CQ13936 2221 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SLC22A20A6NK97 555 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SAP18O00422 153 aaKnown RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SURF4O15260 269 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SHOX2O60902 331 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 OXTP01178 125 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GDF1P27539 372 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 FOXA1P55317 472 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 RPS4XP62701 263 aaKnown RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 RPL19P84098 196 aaKnown RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 ST3GAL3Q11203 375 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 CEACAM7Q14002 265 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 DGUOKQ16854 277 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 FGD3Q5JSP0 725 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SFRP4Q6FHJ7 346 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 P2RY8Q86VZ1 359 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 MS4A15Q8N5U1 240 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 CCDC54Q8NEL0 328 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 LFNGQ8NES3 379 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 FCAMRQ8WWV6 532 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 STARD4Q96DR4 205 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SLC35A5Q9BS91 424 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 TMEM27Q9HBJ8 222 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 TNFRSF12AQ9NP84 129 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GSN-AS1Q9NRJ2 163 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 SLC25A37Q9NYZ2 338 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 CCDC59Q9P031 241 aaKnown RBP4.51□□□□□ -1.69
CCDC39-205ENST00000485055 GSKIPQ9P0R6 139 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 PACSIN3Q9UKS6 424 aa4.51□□□□□ -1.69
CCDC39-205ENST00000485055 DSPPQ9NZW4 1301 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 UNC79Q9P2D8 2635 aa4.5□□□□□ -1.69
CCDC39-205ENST00000485055 ATP6AP2A0A1C7CYW4 349 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms