RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TRAPPC2BP0DI82 140 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 CD79AP11912 226 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 PRKACBP22694 351 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 SLC6A1P30531 599 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 RCVRNP35243 200 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 PTH2RP49190 550 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 SRP9P49458 86 aaKnown RBP5.96□□□□□ -1.45
BRCA1-216ENST00000484087 ACTBP60709 375 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 BTG1P62324 171 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 ACTG1P63261 375 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 BSPH1Q075Z2 132 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 MALLQ13021 153 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 PABPC1L2AQ5JQF8 200 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 Q6ZSR3 168 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 OR2W3Q7Z3T1 314 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 NAA40Q86UY6 237 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 MYPOPQ86VE0 399 aaPredicted RBP5.96□□□□□ -1.45
BRCA1-216ENST00000484087 CCDC36Q8IYA8 594 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 OR4D6Q8NGJ1 314 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 OR52I2Q8NH67 350 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 LILRB1Q8NHL6 650 aaPredicted RBP5.96□□□□□ -1.45
BRCA1-216ENST00000484087 KCNG3Q8TAE7 436 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 UBASH3BQ8TF42 649 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 CHAC2Q8WUX2 184 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 SLC7A6Q92536 515 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 SPSB1Q96BD6 273 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 SGK3Q96BR1 496 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 PERPQ96FX8 193 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 TECTBQ96PL2 329 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 SMR3AQ99954 134 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 NEURL2Q9BR09 285 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 URM1Q9BTM9 101 aaKnown RBP5.96□□□□□ -1.45
BRCA1-216ENST00000484087 CST11Q9H112 138 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 WNT5BQ9H1J7 359 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 AUNIPQ9H7T9 357 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 SCPEP1Q9HB40 452 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 FBLN5Q9UBX5 448 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 SLC7A11Q9UPY5 501 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 MRPS28Q9Y2Q9 187 aaKnown RBP5.96□□□□□ -1.45
BRCA1-216ENST00000484087 USF3Q68DE3 2245 aa5.96□□□□□ -1.45
BRCA1-216ENST00000484087 ZANQ9Y493 2812 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 HEATR1Q9H583 2144 aaKnown RBP5.96□□□□□ -1.46
BRCA1-216ENST00000484087 CIB4A0PJX0 185 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 H7C417 338 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 M0R1B8 84 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 CCNKO75909 580 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 CNOT4O95628 575 aaKnown RBP5.96□□□□□ -1.46
BRCA1-216ENST00000484087 SERPINA5P05154 406 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 PATE4P0C8F1 98 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 CCNOP22674 350 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 DNASE1P24855 282 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 STOMP27105 288 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 HOXC12P31275 282 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 APLNRP35414 380 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 CDKN1AP38936 164 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 EFNB2P52799 333 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 UBE2NP61088 152 aaKnown RBP5.96□□□□□ -1.46
BRCA1-216ENST00000484087 RAB1AP62820 205 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 KLF9Q13886 244 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-216ENST00000484087 PPA1Q15181 289 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 GABRA6Q16445 453 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 RSPO1Q2MKA7 263 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-216ENST00000484087 DEFB113Q30KQ7 82 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 SNAI3Q3KNW1 292 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 KRTAP27-1Q3LI81 207 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 BEX5Q5H9J7 111 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 NCMAPQ5T1S8 102 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 ZBTB37Q5TC79 503 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 GLIPR1L1Q6UWM5 242 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 FTMTQ8N4E7 242 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 CHST4Q8NCG5 386 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 STEAP2Q8NFT2 490 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 OR5L1Q8NGL2 311 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 OR1K1Q8NGR3 316 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 LYZL4Q96KX0 146 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 CCL19Q99731 98 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 NUDT16L1Q9BRJ7 211 aaKnown RBP5.96□□□□□ -1.46
BRCA1-216ENST00000484087 MARVELD1Q9BSK0 173 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 CACNG6Q9BXT2 260 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 CHST5Q9GZS9 411 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 OPA3Q9H6K4 179 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 PCDHB16Q9NRJ7 776 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 MTFP1Q9UDX5 166 aa5.96□□□□□ -1.46
BRCA1-216ENST00000484087 RBMX2Q9Y388 322 aaKnown RBP5.96□□□□□ -1.46
BRCA1-216ENST00000484087 PLCE1Q9P212 2302 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 ARID1AO14497 2285 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 ANKRD20A5PA0PJZ0 165 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 C5orf49A4QMS7 147 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 HMX3A6NHT5 357 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 OR5H1A6NKK0 313 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 ABCD4O14678 606 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 LDLRAD4O15165 306 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 NDUFS7O75251 213 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 KDM4BO94953 1096 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 CYB5AP00167 134 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 HLA-HP01893 362 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 TCRBP04435 133 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 LPLP06858 475 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 SOD3P08294 240 aa5.95□□□□□ -1.46
BRCA1-216ENST00000484087 CELA3BP08861 270 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms