RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 NUDT16L1Q9BRJ7 211 aaKnown RBP14.94□□□□□ -0.02
HDAC6-225ENST00000483506 CNOT2Q9NZN8 540 aaKnown RBP14.94□□□□□ -0.02
HDAC6-225ENST00000483506 NLKQ9UBE8 527 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 DNAJB11Q9UBS4 358 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 ZNF222Q9UK12 451 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 SLC7A11Q9UPY5 501 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 POLDIP2Q9Y2S7 368 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 EXOSC1Q9Y3B2 195 aaKnown RBP14.94□□□□□ -0.02
HDAC6-225ENST00000483506 A0A1B0GW55 424 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 GPR37O15354 613 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 SYNGR1O43759 233 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 ZFPL1O95159 310 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 ECDO95905 644 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-225ENST00000483506 LIPFP07098 398 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 DUX4L2P0CJ85 424 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 DUX4L3P0CJ86 424 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 DUX4L4P0CJ87 422 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 DUX4L5P0CJ88 424 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 DUX4L6P0CJ89 424 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 DUX4L7P0CJ90 424 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 IL24Q13007 206 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 CNN3Q15417 329 aaKnown RBP14.93□□□□□ -0.02
HDAC6-225ENST00000483506 TUSC1Q2TAM9 212 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 DUX4L9Q6RFH8 374 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-225ENST00000483506 CALHM1Q8IU99 346 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 ZNF676Q8N7Q3 588 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 OR51A4Q8NGJ6 313 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 GGHQ92820 318 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 UPRTQ96BW1 309 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 TMEM80Q96HE8 168 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 NRIP2Q9BQI9 281 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 HES4Q9HCC6 221 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 DUX4Q9UBX2 424 aa14.93□□□□□ -0.02
HDAC6-225ENST00000483506 IGKV1-27A0A075B6S5 117 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 IGKV1-9A0A0C4DH69 117 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 EFCAB10A6NFE3 127 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 OR2AT4A6NND4 320 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 MYL12AP19105 171 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 EPHA1P21709 976 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 AQP4P55087 323 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 ERVK11-1P61568 191 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 SMIM21Q3B7S5 101 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 RPL22L1Q6P5R6 122 aaKnown RBP14.92□□□□□ -0.02
HDAC6-225ENST00000483506 TMPRSS11AQ6ZMR5 421 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 ACP7Q6ZNF0 438 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 FAM216BQ8N7L0 139 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 ZNF485Q8NCK3 441 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 OR52N1Q8NH53 320 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 OR5AK2Q8NH90 309 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 TMIGD2Q96BF3 282 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 DMRTB1Q96MA1 342 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 GAFA1Q96PS6 74 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 FKBP14Q9NWM8 211 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 PSORS1C1Q9UIG5 152 aa14.92□□□□□ -0.02
HDAC6-225ENST00000483506 IGKV1D-17A0A075B6S4 117 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 NKX6-3A6NJ46 265 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 SIGLEC5O15389 551 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 ALX3O95076 343 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 MT-ND2P03891 347 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 PSG2P11465 335 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 ZNF20P17024 532 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 ATF1P18846 271 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 GMFBP60983 142 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 ST3GAL4Q11206 333 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 MED21Q13503 144 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 KLF17Q5JT82 389 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-225ENST00000483506 OR2G6Q5TZ20 316 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 ANGPTL5Q86XS5 388 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 OR5T2Q8NGG2 359 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 OR13C3Q8NGS6 347 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 TRMT10AQ8TBZ6 339 aaKnown RBP14.91□□□□□ -0.02
HDAC6-225ENST00000483506 SPSB1Q96BD6 273 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 FGGYQ96C11 551 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 BORCS8Q96FH0 119 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 SDSLQ96GA7 329 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 MED30Q96HR3 178 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 PDCD1LG2Q9BQ51 273 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 COMMD4Q9H0A8 199 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 RASSF4Q9H2L5 321 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 SNTG1Q9NSN8 517 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 CLEC2DQ9UHP7 191 aa14.91□□□□□ -0.02
HDAC6-225ENST00000483506 A0A0A6YYJ9 748 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 FAM230AA0A1W2PPH8 454 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 NDUFB3O43676 98 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 PRKACBP22694 351 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 GTF2A1P52655 376 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-225ENST00000483506 IL13RA1P78552 427 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 RIPK1Q13546 671 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 CDK5R1Q15078 307 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 DGUOKQ16854 277 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 LRRC10Q5BKY1 277 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 ARMCX4Q5H9R4 360 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 XAF1Q6GPH4 301 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 USP43Q70EL4 1123 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 BTN2A1Q7KYR7 527 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 PARP16Q8N5Y8 322 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 PNLDC1Q8NA58 520 aaKnown RBP14.9□□□□□ -0.02
HDAC6-225ENST00000483506 LY6G5BQ8NDX9 201 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 C8orf46Q8TAG6 207 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 NPRL2Q8WTW4 380 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms