RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SRMP19623 302 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 MYL9P24844 172 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 GATA4P43694 442 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 GPR6P46095 362 aaPredicted RBP11.14□□□□□ -0.63
HDAC1-208ENST00000482310 OR3A4PP47883 348 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 SNU13P55769 128 aaKnown RBP11.14□□□□□ -0.63
HDAC1-208ENST00000482310 RIPPLY3P57055 190 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 KISS1Q15726 138 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 SLC25A26Q70HW3 274 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 KRT74Q7RTS7 529 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 KRTAP1-3Q8IUG1 177 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 DEFB108BQ8NET1 73 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 WFDC11Q8NEX6 87 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 OR13F1Q8NGS4 319 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 HPS1Q92902 700 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 PIMREGQ9BSJ6 248 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 CENPOQ9BU64 300 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 FUNDC2Q9BWH2 189 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 BPESC1Q9GZL8 116 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 NAA50Q9GZZ1 169 aaKnown RBP11.14□□□□□ -0.63
HDAC1-208ENST00000482310 CHODLQ9H9P2 273 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 TMEM138Q9NPI0 162 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 DLL4Q9NR61 685 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 RNF7Q9UBF6 113 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 FOXJ3Q9UPW0 622 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 AK6Q9Y3D8 172 aaKnown RBP11.14□□□□□ -0.63
HDAC1-208ENST00000482310 SETD2Q9BYW2 2564 aaPredicted RBP11.13□□□□□ -0.63
HDAC1-208ENST00000482310 TRIM64BA6NI03 449 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 TMEM178BH3BS89 294 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 AIREO43918 545 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 ARL6IP5O75915 188 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 TFF1P04155 84 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 TMEM225BP0DP42 221 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 ADRA2CP18825 462 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 ZNF93P35789 620 aaPredicted RBP11.13□□□□□ -0.63
HDAC1-208ENST00000482310 ALDH3B2P48448 385 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 MXD1Q05195 221 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 GPR107Q5VW38 600 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 ZNF529Q6P280 563 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 CD200R1LQ6Q8B3 271 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 LRRTM1Q86UE6 522 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 MAPK1IP1LQ8NDC0 245 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 OR10K1Q8NGX5 313 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 C10orf105Q8TEF2 133 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 TNFAIP8L1Q8WVP5 186 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 AQP3Q92482 292 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 FOXC2Q99958 501 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 TLNRD1Q9H1K6 362 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 WDR13Q9H1Z4 485 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 MYOZ1Q9NP98 299 aaPredicted RBP11.13□□□□□ -0.63
HDAC1-208ENST00000482310 SNTG1Q9NSN8 517 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 WIPI2Q9Y4P8 454 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 ZFHX3Q15911 3703 aa11.13□□□□□ -0.63
HDAC1-208ENST00000482310 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 SHISA3A0PJX4 238 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 CDRT1O95170 752 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 PTBP3O95758 552 aaKnown RBP11.12□□□□□ -0.63
HDAC1-208ENST00000482310 CSF3P09919 207 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 BCL3P20749 454 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 GLRA1P23415 457 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 OR10A3P58181 314 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 CRIP3Q6Q6R5 217 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 PEG10Q86TG7 708 aaKnown RBP11.12□□□□□ -0.63
HDAC1-208ENST00000482310 C1orf87Q8N0U7 546 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 GCSAMQ8N6F7 178 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 OR5T2Q8NGG2 359 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 OR51F2Q8NH61 342 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 ZNF671Q8TAW3 534 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 Q8TCH9 128 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 ERGIC1Q969X5 290 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 TIMD4Q96H15 378 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 SMURF1Q9HCE7 757 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 DNAJB11Q9UBS4 358 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 ING4Q9UNL4 249 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 GSTK1Q9Y2Q3 226 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 NPTNQ9Y639 398 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 ITPR3Q14573 2671 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 NF1P21359 2839 aa11.12□□□□□ -0.63
HDAC1-208ENST00000482310 PPIAL4EA0A075B759 164 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 RNF223E7ERA6 249 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 PPIAL4DF5H284 164 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 F8VVB4 439 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 F8VWA3 439 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 TRAPPC2LH3BP13 241 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 NXPH2O95156 264 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 CYB5AP00167 134 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 PPIAL4FP0DN26 164 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 RPL5P46777 297 aaKnown RBP11.11□□□□□ -0.63
HDAC1-208ENST00000482310 NPBWR2P48146 333 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 CAV3P56539 151 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 ZP1P60852 638 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 BTG1P62324 171 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 MRPS11P82912 194 aaKnown RBP11.11□□□□□ -0.63
HDAC1-208ENST00000482310 PDZK1IP1Q13113 114 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 RIN1Q13671 783 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 ZMYND11Q15326 602 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 TIMM50Q3ZCQ8 353 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 FAM76BQ5HYJ3 339 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 AWAT2Q6E213 333 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 C1QL2Q7Z5L3 287 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms