RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 GPD1LQ8N335 351 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 ZNF614Q8N883 585 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 C4orf32Q8N8J7 132 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 OR4K17Q8NGC6 315 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 OR9Q1Q8NGQ5 310 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 OR1L8Q8NGR8 309 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 OR5J2Q8NH18 312 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 ZNF564Q8TBZ8 553 aaPredicted RBP3.35□□□□□ -1.87
VPS41-212ENST00000482217 GNPDA2Q8TDQ7 276 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 ASB13Q8WXK3 278 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 GHSRQ92847 366 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 DCPSQ96C86 337 aaKnown RBP3.35□□□□□ -1.87
VPS41-212ENST00000482217 DDIT4LQ96D03 193 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 FBXL15Q9H469 300 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 PRORYQ9H606 182 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 RNF167Q9H6Y7 350 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 RPF2Q9H7B2 306 aaKnown RBP3.35□□□□□ -1.87
VPS41-212ENST00000482217 ZNF442Q9H7R0 627 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 IDI2-AS1Q9NZ38 188 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 SNX10Q9Y5X0 201 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 PALLDQ8WX93 1383 aa3.35□□□□□ -1.87
VPS41-212ENST00000482217 FAM240AA0A1B0GVK7 77 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 LYRM9A8MSI8 78 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 F5H5K5 113 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 F6UB75 175 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 NPIPB9F8W1W9 429 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 ZNF593O00488 134 aaPredicted RBP3.34□□□□□ -1.87
VPS41-212ENST00000482217 CYB5BO43169 146 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 ICOSLGO75144 302 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 ATG12O94817 140 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 PDYNP01213 254 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 THY1P04216 161 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 ARG1P05089 322 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 FGF1P05230 155 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 EDN1P05305 212 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 RPLP0P05388 317 aaKnown RBP3.34□□□□□ -1.87
VPS41-212ENST00000482217 CRYGDP07320 174 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 BPGMP07738 259 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 OR9G9P0C7N8 305 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 PGA4P0DJD7 388 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 PGA3P0DJD8 388 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 CT45A6P0DMU7 189 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 CT45A5P0DMU8 189 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 CT45A7P0DMV0 189 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 ZNF708P17019 499 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 SHC1P29353 583 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 RPA3P35244 121 aaPredicted RBP3.34□□□□□ -1.87
VPS41-212ENST00000482217 ARL2P36404 184 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 RPL35P42766 123 aaKnown RBP3.34□□□□□ -1.87
VPS41-212ENST00000482217 CDKN2BP42772 138 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 PSMD8P48556 350 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 CSRP3P50461 194 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 GZMMP51124 257 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 APOC4P55056 127 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 OR12D2P58182 307 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 TPI1P60174 286 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 SNRPD1P62314 119 aaKnown RBP3.34□□□□□ -1.87
VPS41-212ENST00000482217 RHOBP62745 196 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 DYNLL1P63167 89 aaKnown RBP3.34□□□□□ -1.87
VPS41-212ENST00000482217 GTF2BQ00403 316 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 RPL18AQ02543 176 aaKnown RBP3.34□□□□□ -1.87
VPS41-212ENST00000482217 SRSF9Q13242 221 aaKnown RBP eCLIP3.34□□□□□ -1.87
VPS41-212ENST00000482217 CLINT1Q14677 625 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 RSU1Q15404 277 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 HIST3H3Q16695 136 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 PLPPR5Q32ZL2 321 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 SLC25A35Q3KQZ1 300 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 PARP15Q460N3 678 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 CT45A1Q5HYN5 189 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 OR2B11Q5JQS5 317 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 LEMD1Q68G75 181 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 SMARCD3Q6STE5 483 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 SCIMPQ6UWF3 145 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 IGFL2Q6UWQ7 119 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 ALKAL1Q6UXT8 129 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 TCF24Q7RTU0 167 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 IFNEQ86WN2 208 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 RAB43Q86YS6 212 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 MUC15Q8N387 334 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 WDSUB1Q8N9V3 476 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 OR4P4Q8NGL7 312 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 CT45A3Q8NHU0 189 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 LMO3Q8TAP4 145 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 SSC4DQ8WTU2 575 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 SECTM1Q8WVN6 248 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 TRUB1Q8WWH5 349 aaKnown RBP3.34□□□□□ -1.87
VPS41-212ENST00000482217 DNAJC9Q8WXX5 260 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 SMARCD1Q96GM5 515 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 PYURFQ96I23 114 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 KIR2DL4Q99706 377 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 CCDC32Q9BV29 185 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 SLC25A39Q9BZJ4 359 aaPredicted RBP3.34□□□□□ -1.87
VPS41-212ENST00000482217 VSIRQ9H7M9 311 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 PLEKHA3Q9HB20 300 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 ELF5Q9UKW6 265 aaPredicted RBP3.34□□□□□ -1.87
VPS41-212ENST00000482217 COPS3Q9UNS2 423 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 ASF1AQ9Y294 204 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 PPP2R2CQ9Y2T4 447 aa3.34□□□□□ -1.87
VPS41-212ENST00000482217 CARHSP1Q9Y2V2 147 aaKnown RBP3.34□□□□□ -1.87
VPS41-212ENST00000482217 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms