RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 SLC35A2P78381 396 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 CNN3Q15417 329 aaKnown RBP8.57□□□□□ -1.04
HDAC6-222ENST00000478095 MICBQ29980 383 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 CR1LQ2VPA4 569 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 CCDC58Q4VC31 144 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 ESCO2Q56NI9 601 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 TEX36Q5VZQ5 186 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 DUX4L9Q6RFH8 374 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-222ENST00000478095 NLRC3Q7RTR2 1065 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 ZNF573Q86YE8 665 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 CALHM1Q8IU99 346 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 NANOGP1Q8N7R0 232 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 OR8B3Q8NGG8 313 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 OR10Z1Q8NGY1 313 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 RPS4Y2Q8TD47 263 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 MYDGFQ969H8 173 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 RFT1Q96AA3 541 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 C10orf35Q96D05 121 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 BORCS8Q96FH0 119 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 NEIL1Q96FI4 390 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-222ENST00000478095 SPACA5Q96QH8 159 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 OR8B2Q96RD0 313 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 MND1Q9BWT6 205 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 CCDC90BQ9GZT6 254 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 CTSZQ9UBR2 303 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 DUX4Q9UBX2 424 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 MIOXQ9UGB7 285 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 TLN2Q9Y4G6 2542 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 KIAA1324LA8MWY0 1029 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-222ENST00000478095 TMPRSS2O15393 492 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 OGG1O15527 345 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 RGS10O43665 173 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 FOXH1O75593 365 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 FSTL3O95633 263 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 SELLP14151 372 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 GLRA1P23415 457 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 POU3F4P49335 361 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 FUT6P51993 359 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 GNB2P62879 340 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 MED22Q15528 200 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 KCNJ8Q15842 424 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 FAM120AOSQ5T036 256 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 DMKNQ6E0U4 476 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-222ENST00000478095 FAHD2BQ6P2I3 314 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-222ENST00000478095 UTS2BQ765I0 119 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 RNF144BQ7Z419 303 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 FAM216BQ8N7L0 139 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 POC1AQ8NBT0 407 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 ZNF671Q8TAW3 534 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 GPR148Q8TDV2 347 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 GHSRQ92847 366 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 ORAI1Q96D31 301 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 FAHD2AQ96GK7 314 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 PGLYRP3Q96LB9 341 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 TECTBQ96PL2 329 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 OR5M11Q96RB7 305 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 CCL13Q99616 98 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 SSBP3Q9BWW4 388 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-222ENST00000478095 CDCA4Q9BXL8 241 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 SHARPINQ9H0F6 387 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 RASSF4Q9H2L5 321 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 Q9H521 79 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 DUSP21Q9H596 190 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 SMURF1Q9HCE7 757 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 MMP26Q9NRE1 261 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 TAS2R4Q9NYW5 299 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 CLN8Q9UBY8 286 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 OR5V1Q9UGF6 321 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 LRCH1Q9Y2L9 728 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 POLDIP2Q9Y2S7 368 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 ZNF281Q9Y2X9 895 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 HIVEP2P31629 2446 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 ANK3Q12955 4377 aaKnown RBP8.56□□□□□ -1.04
HDAC6-222ENST00000478095 ABCA1O95477 2261 aa8.56□□□□□ -1.04
HDAC6-222ENST00000478095 FN1P02751 2386 aaKnown RBP8.56□□□□□ -1.04
HDAC6-222ENST00000478095 TRAV20A0A0B4J274 112 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 TRAPPC2LH3BP13 241 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 TNFRSF13BO14836 293 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-222ENST00000478095 CRLF1O75462 422 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 FCN3O75636 299 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 RPSAP08865 295 aaKnown RBP8.55□□□□□ -1.04
HDAC6-222ENST00000478095 PGA5P0DJD9 388 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 MUC1P15941 1255 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-222ENST00000478095 HOXB4P17483 251 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-222ENST00000478095 CELP19835 753 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 PRKACBP22694 351 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 EEF1B2P24534 225 aaKnown RBP8.55□□□□□ -1.04
HDAC6-222ENST00000478095 MPZP25189 248 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 MAP2K4P45985 399 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 RBP2P50120 134 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 MTCP1P56278 107 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 TAS2R43P59537 309 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 IKZF1Q13422 519 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 IRF3Q14653 427 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 RBM48Q5RL73 367 aaKnown RBP8.55□□□□□ -1.04
HDAC6-222ENST00000478095 DCAF12L2Q5VW00 463 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 WDR25Q64LD2 544 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-222ENST00000478095 STUMQ69YW2 141 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 ASPHD2Q6ICH7 369 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 ZNF841Q6ZN19 808 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms