RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 GTF2E2P29084 291 aaKnown RBP3.36□□□□□ -1.87
VPS50-214ENST00000477935 NTSP30990 170 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 CRATP43155 626 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 CCR4P51679 360 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 PMS2P3Q13401 168 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 ZMYND11Q15326 602 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 AANATQ16613 207 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 Q1RN00 199 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 NIPAL3Q6P499 406 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 KCTD9Q7L273 389 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 SBSPONQ8IVN8 264 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 CCDC170Q8IYT3 715 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 ZNF101Q8IZC7 436 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 GPR137CQ8N3F9 429 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 COX18Q8N8Q8 333 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 ZNRF1Q8ND25 227 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 KLHL30-AS1Q8NEE0 82 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 ZNF563Q8TA94 476 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 UBLCP1Q8WVY7 318 aaPredicted RBP3.36□□□□□ -1.87
VPS50-214ENST00000477935 MAIP1Q8WWC4 291 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 ZNF382Q96SR6 550 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 STACQ99469 402 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 FUT8Q9BYC5 575 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 RHOJQ9H4E5 214 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 GLIPR2Q9H4G4 154 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 NMRAL1Q9HBL8 299 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 ZNF319Q9P2F9 582 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 PACSIN2Q9UNF0 486 aaPredicted RBP3.36□□□□□ -1.87
VPS50-214ENST00000477935 RASD1Q9Y272 281 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 VSIG4Q9Y279 399 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 TSSC4Q9Y5U2 329 aaPredicted RBP3.36□□□□□ -1.87
VPS50-214ENST00000477935 MUC4Q99102 2169 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 SUPT3HB4E1H0 165 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 SLC33A1O00400 549 aaPredicted RBP3.35□□□□□ -1.87
VPS50-214ENST00000477935 FMO6PO60774 539 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 SUPT3HO75486 399 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 MFN2O95140 757 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 OTCP00480 354 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 ALDOBP05062 364 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 STMN1P16949 149 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 PAICSP22234 425 aaKnown RBP3.35□□□□□ -1.87
VPS50-214ENST00000477935 PITPNBP48739 271 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 FHITP49789 147 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 NME5P56597 212 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 TNFAIP6P98066 277 aaPredicted RBP3.35□□□□□ -1.87
VPS50-214ENST00000477935 CEACAM16Q2WEN9 425 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 GGTA1PQ4G0N0 100 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 SPIN4Q56A73 249 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 ATAD3CQ5T2N8 411 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 IL23RQ5VWK5 629 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 AP1ARQ63HQ0 302 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 WDR25Q64LD2 544 aaPredicted RBP3.35□□□□□ -1.87
VPS50-214ENST00000477935 NOXRED1Q6NXP6 359 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 METAP1DQ6UB28 335 aaPredicted RBP3.35□□□□□ -1.87
VPS50-214ENST00000477935 EIF3MQ7L2H7 374 aaKnown RBP3.35□□□□□ -1.87
VPS50-214ENST00000477935 DPPA2Q7Z7J5 298 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 VRK2Q86Y07 508 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 Q8N2B8 174 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 C11orf42Q8N5U0 333 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 CD177Q8N6Q3 437 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 ZNF781Q8N8C0 355 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 SLC30A7Q8NEW0 376 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 RHEBL1Q8TAI7 183 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 C16orf78Q8WTQ4 265 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 C10orf82Q8WW14 230 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 SELENOMQ8WWX9 145 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 PTP4A1Q93096 173 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 LHX4Q969G2 390 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 MS4A4EQ96PG1 132 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 TSPAN32Q96QS1 320 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 CDCA4Q9BXL8 241 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 OR11A1Q9GZK7 315 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 PIGUQ9H490 435 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 ALG9Q9H6U8 611 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 MIEF1Q9NQG6 463 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 CTPS2Q9NRF8 586 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 EXD2Q9NVH0 621 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 IL19Q9UHD0 177 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 SNX6Q9UNH7 406 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 FBXO7Q9Y3I1 522 aa3.35□□□□□ -1.87
VPS50-214ENST00000477935 A0A1B0GVI7 797 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 LRRC30A6NM36 301 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 FOXI3A8MTJ6 420 aaPredicted RBP3.34□□□□□ -1.87
VPS50-214ENST00000477935 H3BSA7 217 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 UBXN8O00124 270 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 AKR7A3O95154 331 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 ECDO95905 644 aaPredicted RBP3.34□□□□□ -1.87
VPS50-214ENST00000477935 CSTAP01040 98 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 OPN1SWP03999 348 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 KRT16P08779 473 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 DUX4L4P0CJ87 422 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 THRBP10828 461 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 GFAPP14136 432 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 B4GALT1P15291 398 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 ZNF43P17038 809 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 SLC6A1P30531 599 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 KRTAP12-2P59991 146 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 C2orf80Q0P641 193 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 SKP2Q13309 424 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 KCNJ8Q15842 424 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms