RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 KCNMB1Q16558 191 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 DUSP7Q16829 419 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 KRT71Q3SY84 523 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 ALG10Q5BKT4 473 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 FGD3Q5JSP0 725 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 SLC18B1Q6NT16 456 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 MAVSQ7Z434 540 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 CALHM1Q8IU99 346 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 LINC00346Q8IVM7 164 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 SMYD1Q8NB12 490 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 OR8S1Q8NH09 359 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 OR56B4Q8NH76 319 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 HPSE2Q8WWQ2 592 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 PPP1R14BQ96C90 147 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 UBE2E2Q96LR5 201 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 Q96M85 177 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 C16orf45Q96MC5 204 aaPredicted RBP3.61□□□□□ -1.83
USP4-209ENST00000475873 TSSK2Q96PF2 358 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 OR8B4Q96RC9 309 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 OR52E6Q96RD3 313 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 HSPB9Q9BQS6 159 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 RAD21L1Q9H4I0 556 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 IKZF5Q9H5V7 419 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 DPM3Q9P2X0 92 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 RHBDD3Q9Y3P4 386 aa3.61□□□□□ -1.83
USP4-209ENST00000475873 TRAV27A0A087WT01 109 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 hCG_1809904A0A1W2PP81 198 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 A0A1W2PPE2 198 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 A0A1W2PPI3 338 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 A0A1W2PR64 198 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 A0A1W2PRV1 198 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 SHISA3A0PJX4 238 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 PRSS37A4D1T9 235 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 TRAPPC13A5PLN9 417 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 M0R135 149 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 EBAG9O00559 213 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 NDUFAB1O14561 156 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 RFXANKO14593 260 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 FGF16O43320 207 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 RGS11O94810 467 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 CD7P09564 240 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 SLC2A1P11166 492 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 TMEM11P17152 192 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 TCP1P17987 556 aaKnown RBP3.6□□□□□ -1.83
USP4-209ENST00000475873 GLRA1P23415 457 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 PPIFP30405 207 aaKnown RBP3.6□□□□□ -1.83
USP4-209ENST00000475873 PHBP35232 272 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 ISL1P61371 349 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 FAM3AP98173 230 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 BDH1Q02338 343 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 IL18R1Q13478 541 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 TRIM25Q14258 630 aaKnown RBP3.6□□□□□ -1.83
USP4-209ENST00000475873 HNF4GQ14541 408 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 DPY19L1Q2PZI1 675 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 RFX4Q33E94 735 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 SMUG1Q53HV7 270 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 FAM76BQ5HYJ3 339 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 TPTE2P1Q5T6R2 138 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 AGBL2Q5U5Z8 902 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 THOC7Q6I9Y2 204 aaKnown RBP3.6□□□□□ -1.83
USP4-209ENST00000475873 LYPD4Q6UWN0 246 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 PTCHD4Q6ZW05 846 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 FAM122BQ7Z309 247 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 PATL1Q86TB9 770 aaKnown RBP3.6□□□□□ -1.83
USP4-209ENST00000475873 FOXRED2Q8IWF2 684 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 MSRB3Q8IXL7 192 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 MICU2Q8IYU8 434 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 CYB561A3Q8NBI2 242 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 GJC3Q8NFK1 279 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 FNDC8Q8TC99 324 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 TSEN15Q8WW01 171 aaKnown RBP3.6□□□□□ -1.83
USP4-209ENST00000475873 SPSB4Q96A44 273 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 SGTBQ96EQ0 304 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 ZNF799Q96GE5 643 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 ZNF488Q96MN9 340 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 KCTD7Q96MP8 289 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 OR4C12Q96R67 309 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 MNTQ99583 582 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 CLEC7AQ9BXN2 247 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 PAIP1Q9H074 479 aaKnown RBP3.6□□□□□ -1.83
USP4-209ENST00000475873 TOLLIPQ9H0E2 274 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 ABCG5Q9H222 651 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 SYT4Q9H2B2 425 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 TMEM133Q9H2Q1 129 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 ING3Q9NXR8 418 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 PYCARDQ9ULZ3 195 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 STUB1Q9UNE7 303 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 VSIG4Q9Y279 399 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 SESN1Q9Y6P5 492 aa3.6□□□□□ -1.83
USP4-209ENST00000475873 hCG_38984A0A1B0GV85 526 aa3.59□□□□□ -1.83
USP4-209ENST00000475873 A0A1W2PPH5 198 aa3.59□□□□□ -1.83
USP4-209ENST00000475873 A6NIZ1 184 aa3.59□□□□□ -1.83
USP4-209ENST00000475873 LINC01619G3V211 115 aa3.59□□□□□ -1.83
USP4-209ENST00000475873 G3V318 75 aa3.59□□□□□ -1.83
USP4-209ENST00000475873 SLC16A7O60669 478 aa3.59□□□□□ -1.83
USP4-209ENST00000475873 TRIM13O60858 407 aa3.59□□□□□ -1.83
USP4-209ENST00000475873 ZNF737O75373 536 aa3.59□□□□□ -1.83
USP4-209ENST00000475873 CNIH1O95406 144 aa3.59□□□□□ -1.83
USP4-209ENST00000475873 TK1P04183 234 aa3.59□□□□□ -1.83
USP4-209ENST00000475873 ZCCHC18P0CG32 403 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms