RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 RTL8AQ9BWD3 113 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 BARHL1Q9BZE3 327 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 PKIBQ9C010 78 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 MS4A5Q9H3V2 200 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 ZNF442Q9H7R0 627 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 LIN7BQ9HAP6 207 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 BEX4Q9NWD9 120 aaPredicted RBP6.02□□□□□ -1.45
SHQ1-207ENST00000475558 COL6A5A8TX70 2615 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 TLN2Q9Y4G6 2542 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 TRAV8-7A0A075B6U6 113 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 A0A0G2JK05 382 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 PLSCR5A0PG75 271 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A10PA6NDY2 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A18PA6NE21 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 ZNF503-AS2A6NEH8 195 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A16PA6NEW6 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A20PA6NIJ5 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A8PA6NJQ4 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A7PA6NKC0 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A22PA8MWA6 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 KIAA1324LA8MWY0 1029 aaPredicted RBP6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A12PA8MX19 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A5PA8MXJ8 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A23PA8MXZ1 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 IFNL4K9M1U5 179 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 CTDSPLO15194 276 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 XRCC3O43542 346 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 LY6G6DO95868 133 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 NGFP01138 241 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 CSTBP04080 98 aaKnown RBP6.01□□□□□ -1.45
SHQ1-207ENST00000475558 GLAP06280 429 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 CD3EP07766 207 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A15PP0C7V4 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A13PP0C7W8 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A14PP0C7W9 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM90A24PP0C7X0 464 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 NAT2P11245 290 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 GTF2F2P13984 249 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 ADRA2CP18825 462 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 TNFSF4P23510 183 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 PMELP40967 661 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 WNT5AP41221 380 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 ZNF83P51522 516 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 SSBP1Q04837 148 aaKnown RBP6.01□□□□□ -1.45
SHQ1-207ENST00000475558 SPOCK1Q08629 439 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 UBE2V2Q15819 145 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 ZNF181Q2M3W8 571 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM76BQ5HYJ3 339 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 NCMAPQ5T1S8 102 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 C16orf87Q6PH81 154 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FIP1L1Q6UN15 594 aaKnown RBP6.01□□□□□ -1.45
SHQ1-207ENST00000475558 FAM131AQ6UXB0 335 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 LYPD6Q86Y78 171 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 SAMD12Q8N8I0 201 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 OR52N4Q8NGI2 321 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 OR56B1Q8NGI3 324 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 OR8S1Q8NH09 359 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 SLC25A40Q8TBP6 338 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 RNF170Q96K19 258 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 WFIKKN1Q96NZ8 548 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 SOSTQ9BQB4 213 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 C1QTNF6Q9BXI9 259 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 PLEKHF2Q9H8W4 249 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 NOX3Q9HBY0 568 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 TAS2R8Q9NYW2 309 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 PTTG3PQ9NZH4 202 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 IL36GQ9NZH8 169 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 GLS2Q9UI32 602 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 PURGQ9UJV8 347 aaKnown RBP6.01□□□□□ -1.45
SHQ1-207ENST00000475558 ZDHHC8Q9ULC8 765 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 TMA7Q9Y2S6 64 aaKnown RBP6.01□□□□□ -1.45
SHQ1-207ENST00000475558 POLDIP2Q9Y2S7 368 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 RHBDD3Q9Y3P4 386 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 PMF1-BGLAPU3KQ54 211 aa6.01□□□□□ -1.45
SHQ1-207ENST00000475558 HRNRQ86YZ3 2850 aaPredicted RBP6□□□□□ -1.45
SHQ1-207ENST00000475558 IGLV3-9A0A075B6K5 115 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 A0A1B0GWJ7 208 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 SHISA3A0PJX4 238 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 ZNF850A8MQ14 1090 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 ECDO95905 644 aaPredicted RBP6□□□□□ -1.45
SHQ1-207ENST00000475558 FREM3P0C091 2139 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 TMEM225BP0DP42 221 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 CCL2P13500 99 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 FAHP16930 419 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 ELK1P19419 428 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 APOBEC3AP31941 199 aaPredicted RBP6□□□□□ -1.45
SHQ1-207ENST00000475558 TGFBR1P36897 503 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 MAGEB1P43366 347 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 POU3F4P49335 361 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 INPP1P49441 399 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 MMP15P51511 669 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 CAV3P56539 151 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 KLF3P57682 345 aaPredicted RBP6□□□□□ -1.45
SHQ1-207ENST00000475558 OR10A3P58181 314 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 AP3S2P59780 193 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 SCN1BQ07699 218 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 PSG7Q13046 419 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 PDZK1IP1Q13113 114 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 PRDX4Q13162 271 aa6□□□□□ -1.45
SHQ1-207ENST00000475558 RSU1Q15404 277 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms