RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 DLGAP1O14490 977 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 NPFFO15130 113 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 APOL3O95236 402 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 NDUFB7P17568 137 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 HTR1FP30939 366 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 CLVS2Q5SYC1 327 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 BCL2L15Q5TBC7 163 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 CMTM4Q8IZR5 234 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 OR4F5Q8NH21 305 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 NPRL2Q8WTW4 380 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 EME1Q96AY2 570 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 CENPNQ96H22 339 aaPredicted RBP15.19■□□□□ 0.02
COL7A1-209ENST00000474432 AJUBAQ96IF1 538 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 TBX5Q99593 518 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 ZNRD1Q9P1U0 126 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 GTF2A1LQ9UNN4 478 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 SNX5Q9Y5X3 404 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 WNK1Q9H4A3 2382 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 A0A1B0GUS0 222 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 RFPL4AA6NLU0 287 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 DHRS7CA6NNS2 312 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 E9PQ18 207 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 RFPL4AL1F8VTS6 287 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 J3QT63 122 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 FCGR1AP12314 374 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 MPZP25189 248 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 HAAOP46952 286 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 RPL15P61313 204 aaKnown RBP15.18■□□□□ 0.02
COL7A1-209ENST00000474432 OLFML2AQ68BL7 652 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 ASRGL1Q7L266 308 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 CATSPERDQ86XM0 798 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 CALHM1Q8IU99 346 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 C11orf42Q8N5U0 333 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 RORBQ92753 470 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 UBE2FQ969M7 185 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 NRIP2Q9BQI9 281 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 BEX1Q9HBH7 125 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 HES4Q9HCC6 221 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 C19orf12Q9NSK7 152 aa15.18■□□□□ 0.02
COL7A1-209ENST00000474432 VWFP04275 2813 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 CMYA5Q8N3K9 4069 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 CLPSL1A2RUU4 121 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 WIPF1O43516 503 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 RPP14O95059 124 aaKnown RBP15.17■□□□□ 0.02
COL7A1-209ENST00000474432 CRYBA1P05813 215 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 OR2T7P0C7T2 308 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 SAA4P35542 130 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 CEBPDP49716 269 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-209ENST00000474432 UBE2E1P51965 193 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 ACTR3P61158 418 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 ISL1P61371 349 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 ERVK11-1P61568 191 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 GUCA2AQ02747 115 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 TMEM185AQ8NFB2 350 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 OR2T27Q8NH04 317 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 LINC01006Q8NI28 216 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 RIBC2Q9H4K1 309 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 METTL8Q9H825 291 aaKnown RBP15.17■□□□□ 0.02
COL7A1-209ENST00000474432 ENOPH1Q9UHY7 261 aa15.17■□□□□ 0.02
COL7A1-209ENST00000474432 TRBV23-1A0A0A0MS06 115 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 A0A1W2PQ09 198 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 METTL15A6NJ78 407 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 SAC3D1A6NKF1 404 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 KNG1P01042 644 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 FBP1P09467 338 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 PRDX2P32119 198 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 ZNF85Q03923 595 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 ANGPTL5Q86XS5 388 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 ZNF573Q86YE8 665 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 BATF2Q8N1L9 274 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 PRSS35Q8N3Z0 413 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 YIPF7Q8N8F6 280 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 OR8J1Q8NGP2 316 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 C17orf50Q8WW18 174 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 CITED1Q99966 193 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 FAM96BQ9Y3D0 163 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 DSCAML1Q8TD84 2053 aa15.16■□□□□ 0.02
COL7A1-209ENST00000474432 IGKV1-27A0A075B6S5 117 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 F8VVB4 439 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 F8VWA3 439 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 H3BNX3 289 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 SULT1C4O75897 302 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 KRT8P05787 483 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 PROK1P58294 105 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 UBE2V2Q15819 145 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 ODF4Q2M2E3 257 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 SMIM21Q3B7S5 101 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 TMEM200BQ69YZ2 307 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 Q6ZSV7 163 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 ZSCAN4Q8NAM6 433 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-209ENST00000474432 PYDC1Q8WXC3 89 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 DPAGT1Q9H3H5 408 aa15.15■□□□□ 0.02
COL7A1-209ENST00000474432 MEIOCA2RUB1 952 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 ANKRD61A6NGH8 418 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 H3BSH0 61 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 J3QRE1 110 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 ALPLP05186 524 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 EEF1B2P24534 225 aaKnown RBP15.14■□□□□ 0.01
COL7A1-209ENST00000474432 KIR3DL2P43630 455 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 ERVFRD-1P60508 538 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms