RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CFAP52Q8N1V2 620 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 ZNF485Q8NCK3 441 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 OR5M3Q8NGP4 307 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 OR5K2Q8NHB8 316 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 MCFD2Q8NI22 146 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 C8orf46Q8TAG6 207 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 ACER1Q8TDN7 264 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 RNF141Q8WVD5 230 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 TMEM101Q96IK0 257 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 DCBLD2Q96PD2 775 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 GFM1Q96RP9 751 aaKnown RBP3.02□□□□□ -1.93
UBR3-208ENST00000474426 TBX15Q96SF7 602 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 AGPAT1Q99943 283 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 EBPLQ9BY08 206 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 OR8D2Q9GZM6 311 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 EXOSC3Q9NQT5 275 aaKnown RBP3.02□□□□□ -1.93
UBR3-208ENST00000474426 CA10Q9NS85 328 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 KCNS2Q9ULS6 477 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 COA3Q9Y2R0 106 aaPredicted RBP3.02□□□□□ -1.93
UBR3-208ENST00000474426 PNMA8CA0A1B0GUJ8 204 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 H3BS24 57 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 PHF1O43189 567 aaPredicted RBP3.02□□□□□ -1.93
UBR3-208ENST00000474426 SPRY2O43597 315 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 EEDO75530 441 aaKnown RBP3.02□□□□□ -1.93
UBR3-208ENST00000474426 NDUFA7O95182 113 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 CRYAAP02489 173 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 CSN3P07498 182 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 NHLRC4P0CG21 123 aaPredicted RBP3.02□□□□□ -1.93
UBR3-208ENST00000474426 CDAP32320 146 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 CRYZQ08257 329 aaKnown RBP3.02□□□□□ -1.93
UBR3-208ENST00000474426 PDGFRLQ15198 375 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 TRMT12Q53H54 448 aaKnown RBP3.02□□□□□ -1.93
UBR3-208ENST00000474426 C6orf141Q5SZD1 244 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 GGNBP1Q5YKI7 109 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 ZADH2Q8N4Q0 377 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 SLC35G3Q8N808 338 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 CRYGNQ8WXF5 182 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 FGGYQ96C11 551 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 MS4A10Q96PG2 267 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 DDOQ99489 341 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 CDX2Q99626 313 aaPredicted RBP3.02□□□□□ -1.93
UBR3-208ENST00000474426 C20orf27Q9GZN8 174 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 MS4A6AQ9H2W1 248 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 CDCP1Q9H5V8 836 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 RNF167Q9H6Y7 350 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 ZDHHC11Q9H8X9 412 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 FLRT1Q9NZU1 646 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 WIPI2Q9Y4P8 454 aa3.02□□□□□ -1.93
UBR3-208ENST00000474426 FRMPD3Q5JV73 1810 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 ADAMTSL1Q8N6G6 1762 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 SMIM28A0A1B0GU29 152 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 A0A1B0GW64 132 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 TMEM189A5PLL7 270 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 GALR3O60755 368 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 RAMP2O60895 175 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 CLDN1O95832 211 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 CLIC3O95833 236 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 OR5AC1P0C628 307 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 PRSS56P0CW18 603 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 PGA3P0DJD8 388 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 PGAM2P15259 253 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 TCN2P20062 427 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 USF1P22415 310 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 APOBEC1P41238 236 aaKnown RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 GZMMP51124 257 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 EFNB2P52799 333 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 PCBP3P57721 371 aaKnown RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 FMODQ06828 376 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 FAM27E3Q08E93 113 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 HSD52Q0P140 79 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 HSPB3Q12988 150 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 NKPD1Q17RQ9 610 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 ZNF385BQ569K4 471 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 GLT8D1Q68CQ7 371 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 Q6ZSR6 202 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 CBLL1Q75N03 491 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 MON1BQ7L1V2 547 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 DUSP18Q8NEJ0 188 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 IL22RA2Q969J5 263 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 PKMYT1Q99640 499 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 TMEM74BQ9NUR3 256 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 ZNF226Q9NYT6 803 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 OR5AC2Q9NZP5 309 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 TESQ9UGI8 421 aaKnown RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 NAT8BQ9UHF3 227 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 TP53TG1Q9Y2A0 90 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 NUP210LQ5VU65 1888 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 LTBP4Q8N2S1 1624 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 ITSN1Q15811 1721 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 ZNF142P52746 1687 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 TRAV38-1A0A0B4J264 116 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 A0A0D9SG52 128 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 LOC107984640A0A0U1RRK4 108 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 H7BYZ3 331 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 REG1AP05451 166 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 ELANEP08246 267 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 SLC2A2P11168 524 aaPredicted RBP3.01□□□□□ -1.93
UBR3-208ENST00000474426 ZNF84P51523 738 aa3.01□□□□□ -1.93
UBR3-208ENST00000474426 SGSHP51688 502 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms