RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 RIPPLY2Q5TAB7 128 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 ATPAF1Q5TC12 328 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 HIST2H3PS2Q5TEC6 136 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 STPG1Q5TH74 334 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 ASPHD2Q6ICH7 369 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 OR10K2Q6IF99 312 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 PLXDC2Q6UX71 529 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 NHLRC1Q6VVB1 395 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 LHFPL2Q6ZUX7 228 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 HIST2H3AQ71DI3 136 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 SLC16A14Q7RTX9 510 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 DPPA2Q7Z7J5 298 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 SLC51BQ86UW2 128 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 SLC25A42Q86VD7 318 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 TMEM123Q8N131 208 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 GALNT16Q8N428 558 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 LRRC18Q8N456 261 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 OR11H4Q8NGC9 324 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 OR4D10Q8NGI6 311 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 OR52B4Q8NGK2 314 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 OR5M8Q8NGP6 311 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 IL17DQ8TAD2 202 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 SCARB1Q8WTV0 552 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 NUDCD2Q8WVJ2 157 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 HAS2Q92819 552 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 BORCS8Q96FH0 119 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 THOC3Q96J01 351 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 FER1L6-AS2Q96M78 137 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF385AQ96PM9 386 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 SLC6A7Q99884 636 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 VRK1Q99986 396 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 EDEM2Q9BV94 578 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 PRRG4Q9BZD6 226 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 ZMAT3Q9HA38 289 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 PNRC2Q9NPJ4 139 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 CA10Q9NS85 328 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 TMEM38BQ9NVV0 291 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 ATPIF1Q9UII2 106 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 EDARQ9UNE0 448 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 PIGLQ9Y2B2 252 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 KLF13Q9Y2Y9 288 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 V9GYS6 101 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 ZFHX4Q86UP3 3567 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 CPAMD8Q8IZJ3 1885 aa5.13□□□□□ -1.59
ATPAF1-204ENST00000474020 MPDZO75970 2070 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 KMT2BQ9UMN6 2715 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 IGHV3-15A0A0B4J1V0 119 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 A0A0B4J2A0 478 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 LOC101059948A0A1B0GTJ6 334 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 A0A1W2PRX2 142 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF814B7Z6K7 855 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 MCRIP1C9JLW8 97 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF587BE7ETH6 402 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 STMND1H3BQB6 276 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 I3L521 148 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 M0R296 226 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 SMAD9O15198 467 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 TPD52L2O43399 206 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 CXCL13O43927 109 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 MRPL33O75394 65 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 B3GALNT1O75752 331 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 DUS4LO95620 317 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 PMP2P02689 132 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 SERPINA5P05154 406 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 PGAM2P15259 253 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 MGMTP16455 207 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 AKR1C4P17516 323 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 SERPINA2P20848 420 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 BLVRBP30043 206 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 DLSTP36957 453 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 ALDH3B1P43353 468 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 RBP2P50120 134 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 ATP1B3P54709 279 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 MTCP1P56278 107 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 QRFPP83859 136 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 NHLH1Q02575 133 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 MALLQ13021 153 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 AIMP2Q13155 320 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 DHRS2Q13268 280 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 ENDOGQ14249 297 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF345Q14585 488 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 SMCO1Q147U7 214 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 LPAL2Q16609 132 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 MOGAT2Q3SYC2 334 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 TMEM128Q5BJH2 165 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 ABLIM2Q6H8Q1 611 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 H3F3CQ6NXT2 135 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 TMEM65Q6PI78 240 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 KCTD9Q7L273 389 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 GALNTL5Q7Z4T8 443 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 YRDCQ86U90 279 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF546Q86UE3 836 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 LYPD6Q86Y78 171 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 PDZD9Q8IXQ8 264 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 OR5AS1Q8N127 324 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 OR10D3Q8NH80 312 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 TERB2Q8NHR7 220 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 LRRC20Q8TCA0 184 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 CASTOR1Q8WTX7 329 aa5.12□□□□□ -1.59
ATPAF1-204ENST00000474020 MITD1Q8WV92 249 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms