RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 CHST5Q9GZS9 411 aa10.72□□□□□ -0.69
SHROOM3-204ENST00000473602 MS4A7Q9GZW8 240 aaPredicted RBP10.72□□□□□ -0.69
SHROOM3-204ENST00000473602 GPR173Q9NS66 373 aa10.72□□□□□ -0.69
SHROOM3-204ENST00000473602 ZNF69Q9UC07 566 aa10.72□□□□□ -0.69
SHROOM3-204ENST00000473602 RPUSD1Q9UJJ7 312 aaKnown RBP10.72□□□□□ -0.69
SHROOM3-204ENST00000473602 RPL36Q9Y3U8 105 aaKnown RBP10.72□□□□□ -0.69
SHROOM3-204ENST00000473602 LOC107986453A0A1B0GWG9 222 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 OR2AT4A6NND4 320 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 SIGLEC5O15389 551 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 NOS1APO75052 506 aaPredicted RBP10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 FCN3O75636 299 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 SERPINA3P01011 423 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 RPSAP08865 295 aaKnown RBP10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 HTR1AP08908 422 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 ACAA1P09110 424 aaPredicted RBP10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 AMY2BP19961 511 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 MPZP25189 248 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 KIR3DL2P43630 455 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 OR12D2P58182 307 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 GALEQ14376 348 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 RCN1Q15293 331 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 ODF4Q2M2E3 257 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 GPR157Q5UAW9 335 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 METTL11BQ5VVY1 283 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 BTN2A1Q7KYR7 527 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 FAM216BQ8N7L0 139 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 HAVCR2Q8TDQ0 301 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 RNF166Q96A37 237 aaPredicted RBP10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 WDFY2Q96P53 400 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 DUX5Q96PT3 197 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 PKIBQ9C010 78 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 RASSF4Q9H2L5 321 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 UNKLQ9H9P5 680 aaKnown RBP10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 ZMAT3Q9HA38 289 aaKnown RBP10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 SNTG1Q9NSN8 517 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 MRPS18AQ9NVS2 196 aaKnown RBP10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 AASSQ9UDR5 926 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 SLC7A11Q9UPY5 501 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 KPTNQ9Y664 436 aa10.71□□□□□ -0.69
SHROOM3-204ENST00000473602 NOTCH1P46531 2555 aa10.71□□□□□ -0.7
SHROOM3-204ENST00000473602 TOX4O94842 621 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 PGA5P0DJD9 388 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 IGHV4-38-2P0DP08 117 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 MMP9P14780 707 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 CAV3P56539 151 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 GMFBP60983 142 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 IL24Q13007 206 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 PDCD1Q15116 288 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 CNN3Q15417 329 aaKnown RBP10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 KLHL22Q53GT1 634 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 DMRTC1Q5HYR2 192 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 TTC23Q5W5X9 447 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 KIR3DL3Q8N743 410 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 SIGLECL1Q8N7X8 197 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 LY6G5BQ8NDX9 201 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 OR5T2Q8NGG2 359 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 C8orf46Q8TAG6 207 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 APH1BQ8WW43 257 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 PELI1Q96FA3 418 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 C4orf36Q96KX1 117 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 GAFA1Q96PS6 74 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 ALG8Q9BVK2 526 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 JAM3Q9BX67 310 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 SIRPDQ9H106 197 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 CNTD2Q9H8S5 307 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 ERVK13-1Q9NX77 482 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 FRRS1LQ9P0K9 344 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 SLC25A10Q9UBX3 287 aaPredicted RBP10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 ZNF222Q9UK12 451 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 MYRFQ9Y2G1 1151 aa10.7□□□□□ -0.7
SHROOM3-204ENST00000473602 IGKV1D-17A0A075B6S4 117 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 A0A1B0GW55 424 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 IRGMA1A4Y4 181 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 A6NIN4 97 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 J3QLW9 94 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 SYNGR1O43759 233 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 DUX4L2P0CJ85 424 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 DUX4L3P0CJ86 424 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 DUX4L4P0CJ87 422 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 DUX4L5P0CJ88 424 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 DUX4L6P0CJ89 424 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 DUX4L7P0CJ90 424 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 PSG2P11465 335 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 ZNF19P17023 458 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 PRTN3P24158 256 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 FUT6P51993 359 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 NANOS3P60323 173 aaKnown RBP10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 ELF3P78545 371 aaPredicted RBP10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 IKZF1Q13422 519 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 IL18R1Q13478 541 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 ALKBH1Q13686 389 aaKnown RBP10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 LRRC36Q1X8D7 754 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 ZNF691Q5VV52 312 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 DUX4L9Q6RFH8 374 aaPredicted RBP10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 ACP7Q6ZNF0 438 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 UTS2BQ765I0 119 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 LHFPL3Q86UP9 236 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 CMTM4Q8IZR5 234 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 SETD9Q8NE22 299 aa10.69□□□□□ -0.7
SHROOM3-204ENST00000473602 DNAAF1Q8NEP3 725 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms