RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 VGLL3A8MV65 326 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 ODF3BA8MYP8 253 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 PRR32B1ATL7 298 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 ZNF878C9JN71 531 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 H0YAE9 185 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 TNFRSF11BO00300 401 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 EI24O14681 340 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 IDH3BO43837 385 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 GADD45GO95257 159 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 DDOSTP39656 456 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 OPRL1P41146 370 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 AQP4P55087 323 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 MZT1Q08AG7 82 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 AANATQ16613 207 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 TIGD6Q17RP2 521 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 MICAQ29983 383 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 TEX30Q5JUR7 227 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 KDM4DQ6B0I6 523 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 FAHD1Q6P587 224 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 C11orf88Q6PI97 169 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 IZUMO2Q6UXV1 221 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 TCF23Q7RTU1 214 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 HS3ST5Q8IZT8 346 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 TMEM185AQ8NFB2 350 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 OR4S1Q8NGB4 309 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 OR10Z1Q8NGY1 313 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 RNF133Q8WVZ7 376 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 DNAJC9Q8WXX5 260 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 SDSLQ96GA7 329 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 RDH12Q96NR8 316 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 OR51I2Q9H344 312 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 OPA3Q9H6K4 179 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 INPP5EQ9NRR6 644 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 SAMHD1Q9Y3Z3 626 aaKnown RBP7.72□□□□□ -1.17
MCF2L-223ENST00000473345 CDH10Q9Y6N8 788 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 TENM3Q9P273 2699 aa7.72□□□□□ -1.17
MCF2L-223ENST00000473345 SH2D7A6NKC9 451 aaPredicted RBP7.71□□□□□ -1.18
MCF2L-223ENST00000473345 FAM183AA6NL82 134 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 DENRO43583 198 aaKnown RBP7.71□□□□□ -1.18
MCF2L-223ENST00000473345 SYNGR1O43759 233 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 MTRF1O75570 445 aaKnown RBP7.71□□□□□ -1.18
MCF2L-223ENST00000473345 SOX14O95416 240 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 CST4P01036 141 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 GASTP01350 101 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 ANXA8P13928 327 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 PRKACGP22612 351 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 POU1F1P28069 291 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 IFNGR2P38484 337 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 NAA10P41227 235 aaPredicted RBP7.71□□□□□ -1.18
MCF2L-223ENST00000473345 HSPA13P48723 471 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 DAPP51397 102 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 GPM6AP51674 278 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 EMX1Q04741 257 aaPredicted RBP7.71□□□□□ -1.18
MCF2L-223ENST00000473345 EIF2B1Q14232 305 aaKnown RBP7.71□□□□□ -1.18
MCF2L-223ENST00000473345 CNN3Q15417 329 aaKnown RBP7.71□□□□□ -1.18
MCF2L-223ENST00000473345 CEP78Q5JTW2 689 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 ETV3LQ6ZN32 361 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 TIGD4Q8IY51 512 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 OR8B12Q8NGG6 310 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 OR2T4Q8NH00 348 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 GNPDA2Q8TDQ7 276 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 PIGCQ92535 297 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 MED30Q96HR3 178 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 RNF170Q96K19 258 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 VCXQ9H320 206 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.71□□□□□ -1.18
MCF2L-223ENST00000473345 GAR1Q9NY12 217 aaKnown RBP7.71□□□□□ -1.18
MCF2L-223ENST00000473345 IL20Q9NYY1 176 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 RAB26Q9ULW5 256 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 U3KQV3 271 aa7.71□□□□□ -1.18
MCF2L-223ENST00000473345 RFPL4AA6NLU0 287 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 RFPL4AL1F8VTS6 287 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 E2F6O75461 281 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 CD33P20138 364 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 GLRA1P23415 457 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 FMO3P31513 532 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 SLC25A1P53007 311 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 ADARB1P78563 741 aaKnown RBP7.7□□□□□ -1.18
MCF2L-223ENST00000473345 EGFEM1PQ0D2K5 195 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 TAF13Q15543 124 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 DEFB121Q5J5C9 76 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 NKAPLQ5M9Q1 402 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 BAIAP2L2Q6UXY1 529 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 CD300LDQ6UXZ3 194 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 ACP7Q6ZNF0 438 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 C18orf65Q6ZTR6 163 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 KCTD8Q6ZWB6 473 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 KRT74Q7RTS7 529 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 IQCF1Q8N6M8 205 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 OR4F17Q8NGA8 305 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 OR5D13Q8NGL4 314 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 OR6K6Q8NGW6 343 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 OR6N2Q8NGY6 317 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 GIPC3Q8TF64 312 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 AQP3Q92482 292 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 TFAP2CQ92754 450 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 OR4F4Q96R69 305 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 FEVQ99581 238 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 MICU1Q9BPX6 476 aa7.7□□□□□ -1.18
MCF2L-223ENST00000473345 RTL8AQ9BWD3 113 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms