RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 STEAP1Q9UHE8 339 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 CACNG2Q9Y698 323 aa16.23■□□□□ 0.19
PSPC1-203ENST00000471658 DSCAMO60469 2012 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 LY6HO94772 140 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 CALCBP10092 127 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 MZT1Q08AG7 82 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 PLA2G7Q13093 441 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 FAM209AQ5JX71 171 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 AWAT2Q6E213 333 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 OR10K1Q8NGX5 313 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 OR51F2Q8NH61 342 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 C1orf147Q96MC9 270 aaPredicted RBP16.22■□□□□ 0.19
PSPC1-203ENST00000471658 LIN7BQ9HAP6 207 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 GCM1Q9NP62 436 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 DCAF16Q9NXF7 216 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 MTCH1Q9NZJ7 389 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 AKAP6Q13023 2319 aa16.22■□□□□ 0.19
PSPC1-203ENST00000471658 A0A1W2PP11 408 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 F8VVB4 439 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 F8VWA3 439 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 J3QT63 122 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 OVOL3O00110 214 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 CDC14BO60729 498 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 MPZP25189 248 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 NPBWR2P48146 333 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 GMFBP60983 142 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 PCGF3Q3KNV8 242 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 OR10K2Q6IF99 312 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 WDR82Q6UXN9 313 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 PNLDC1Q8NA58 520 aaKnown RBP16.21■□□□□ 0.19
PSPC1-203ENST00000471658 CCL19Q99731 98 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 SLIRPQ9GZT3 109 aaKnown RBP16.21■□□□□ 0.19
PSPC1-203ENST00000471658 EGLN1Q9GZT9 426 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 SAP30LQ9HAJ7 183 aa16.21■□□□□ 0.19
PSPC1-203ENST00000471658 ELL3Q9HB65 397 aaPredicted RBP16.21■□□□□ 0.19
PSPC1-203ENST00000471658 CCDC59Q9P031 241 aaKnown RBP16.21■□□□□ 0.19
PSPC1-203ENST00000471658 CHD3Q12873 2000 aaKnown RBP16.21■□□□□ 0.19
PSPC1-203ENST00000471658 LYNX1G3V0Z9 82 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 LYNX1P0DP58 116 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 BMP4P12644 408 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 GATA4P43694 442 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 RIN1Q13671 783 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 TESK1Q15569 626 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 C2orf76Q3KRA6 126 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 METAP1DQ6UB28 335 aaPredicted RBP16.2■□□□□ 0.18
PSPC1-203ENST00000471658 ASCL4Q6XD76 172 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 OR5H6Q8NGV6 325 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 FAM3DQ96BQ1 224 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 PKIBQ9C010 78 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 RAB1BQ9H0U4 201 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 OR5V1Q9UGF6 321 aa16.2■□□□□ 0.18
PSPC1-203ENST00000471658 hCG_1807616A0A1W2PRN6 198 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 H7C417 338 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 AKR7A2O43488 359 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 SFTPBP07988 381 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 BCL3P20749 454 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 CFPP27918 469 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 SOX6P35712 828 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 IL24Q13007 206 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 CPNE2Q96FN4 548 aaPredicted RBP16.19■□□□□ 0.18
PSPC1-203ENST00000471658 FN3KRPQ9HA64 309 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 PPP1R3CQ9UQK1 317 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 PTPN13Q12923 2485 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 CENPEQ02224 2701 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 NBPF19A0A087WUL8 3843 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 TACC2O95359 2948 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 WNT9BO14905 357 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 VSIG8P0DPA2 414 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 COL8A2P25067 703 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 DGUOKQ16854 277 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 SLC22A6Q4U2R8 563 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 FAM201AQ5SY85 155 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 CROCCP3Q8IVE0 287 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 MKXQ8IYA7 352 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 TMEM104Q8NE00 496 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 ZNF671Q8TAW3 534 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 LGALS14Q8TCE9 139 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 SEH1LQ96EE3 360 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 SMURF1Q9HCE7 757 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 COMMD3Q9UBI1 195 aa16.19■□□□□ 0.18
PSPC1-203ENST00000471658 FBXO9Q9UK97 447 aaPredicted RBP16.19■□□□□ 0.18
PSPC1-203ENST00000471658 CYB5R3P00387 301 aaPredicted RBP16.18■□□□□ 0.18
PSPC1-203ENST00000471658 ARSBP15848 533 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 EGR1P18146 543 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 TNFRSF1AP19438 455 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 QRFPP83859 136 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 BOLLQ8N9W6 283 aaKnown RBP16.18■□□□□ 0.18
PSPC1-203ENST00000471658 ZSCAN4Q8NAM6 433 aaPredicted RBP16.18■□□□□ 0.18
PSPC1-203ENST00000471658 PXT1Q8NFP0 134 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 TBC1D15Q8TC07 691 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 LRRC29Q8WV35 223 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 YIPF5Q969M3 257 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 FAM46BQ96A09 425 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 S100A13Q99584 98 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 METTL9Q9H1A3 318 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 BANF2Q9H503 90 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 RBFOX1Q9NWB1 397 aaKnown RBP16.18■□□□□ 0.18
PSPC1-203ENST00000471658 PLEKHA6Q9Y2H5 1048 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 USF3Q68DE3 2245 aa16.18■□□□□ 0.18
PSPC1-203ENST00000471658 IGHV1-69-2A0A0G2JMI3 117 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms