RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 OR13C9Q8NGT0 318 aa10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 ZNF420Q8TAQ5 688 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 LRRC29Q8WV35 223 aa10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 DVL3Q92997 716 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 C18orf12Q96KH6 178 aa10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 TMUB1Q9BVT8 246 aa10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 FGF23Q9GZV9 251 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 TCF7L1Q9HCS4 588 aa10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 SNTG1Q9NSN8 517 aa10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 MIOXQ9UGB7 285 aa10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 ITPR3Q14573 2671 aa10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 DYSFO75923 2080 aa10.61□□□□□ -0.71
SPTLC1-204ENST00000469778 A0A096LNT2 108 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 MAGEA13PA6NCF6 341 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 ZNF780AO75290 641 aaPredicted RBP10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 INMTO95050 263 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 CYB5R3P00387 301 aaPredicted RBP10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 PGA5P0DJD9 388 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 SRMP19623 302 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 FGF9P31371 208 aaPredicted RBP10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 GZMKP49863 264 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 GPR176Q14439 515 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 SMIM21Q3B7S5 101 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 TIMM50Q3ZCQ8 353 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 ZNF404Q494X3 552 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 HSD17B12Q53GQ0 312 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 FIP1L1Q6UN15 594 aaKnown RBP10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 ZNF826PQ6ZT77 177 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 NLRC3Q7RTR2 1065 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 PNLDC1Q8NA58 520 aaKnown RBP10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 TRMT10AQ8TBZ6 339 aaKnown RBP10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 TMEM203Q969S6 136 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 MUL1Q969V5 352 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 TMIGD2Q96BF3 282 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 C1orf159Q96HA4 380 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 COX4I2Q96KJ9 171 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 NRIP2Q9BQI9 281 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 UQCC2Q9BRT2 126 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 NOX4Q9NPH5 578 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 TAS2R4Q9NYW5 299 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 TREM2Q9NZC2 230 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 PCDHB10Q9UN67 800 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 GSTK1Q9Y2Q3 226 aa10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 CHD3Q12873 2000 aaKnown RBP10.6□□□□□ -0.71
SPTLC1-204ENST00000469778 TRAV1-2A0A0B4J238 106 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 IGHV3-64DA0A0J9YX35 117 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 ISPDA4D126 451 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 H7C1Q1 480 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 GPR37O15354 613 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 PIN1P1O15428 100 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 CD37P11049 281 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 GLRA1P23415 457 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 ZNF93P35789 620 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 NPY4RP50391 375 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 ERVK11-1P61568 191 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 NEDD8Q15843 81 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 SSX1Q16384 188 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 ASCL4Q6XD76 172 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 SLC25A26Q70HW3 274 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 ANGPTL5Q86XS5 388 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 CALHM1Q8IU99 346 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 OR13C5Q8NGS8 318 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 OR51F2Q8NH61 342 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 POM121Q96HA1 1249 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 MED30Q96HR3 178 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 CEP19Q96LK0 163 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 GPER1Q99527 375 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 GAL3ST1Q99999 423 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 PATZ1Q9HBE1 687 aaKnown RBP10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 HES4Q9HCC6 221 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 KAAG1Q9UBP8 84 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 DNAJB11Q9UBS4 358 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 GHRLQ9UBU3 117 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 STUB1Q9UNE7 303 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 SSR3Q9UNL2 185 aa10.59□□□□□ -0.71
SPTLC1-204ENST00000469778 CSMD1Q96PZ7 3565 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 TANC2Q9HCD6 1990 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 IGKV1-27A0A075B6S5 117 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 IGHV4-61A0A0C4DH41 118 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 B4DSR2 109 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 TRAPPC2LH3BP13 241 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 H3BUI4 141 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 GABRPO00591 440 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 TNFRSF13BO14836 293 aaPredicted RBP10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 NXPH2O95156 264 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 INHBBP09529 407 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 WNT2P09544 360 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 TMEM225BP0DP42 221 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 PTGFRP43088 359 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 CAPZA1P52907 286 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 LMO4P61968 165 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 RPS25P62851 125 aaKnown RBP10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 FABP5Q01469 135 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 AVPI1Q5T686 147 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 DDI2Q5TDH0 399 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 GLT8D1Q68CQ7 371 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 ELP2Q6IA86 826 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 ASPHD2Q6ICH7 369 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 TMEM91Q6ZNR0 172 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms