RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SSPNQ14714 243 aa12.77□□□□□ -0.37
CBWD3-205ENST00000469687 ELP2Q6IA86 826 aa12.77□□□□□ -0.37
CBWD3-205ENST00000469687 BRICD5Q6PL45 260 aa12.77□□□□□ -0.37
CBWD3-205ENST00000469687 MOB3CQ70IA8 216 aa12.77□□□□□ -0.37
CBWD3-205ENST00000469687 BOLLQ8N9W6 283 aaKnown RBP12.77□□□□□ -0.37
CBWD3-205ENST00000469687 ZSCAN4Q8NAM6 433 aaPredicted RBP12.77□□□□□ -0.37
CBWD3-205ENST00000469687 CPT1CQ8TCG5 803 aa12.77□□□□□ -0.37
CBWD3-205ENST00000469687 EMG1Q92979 244 aaKnown RBP12.77□□□□□ -0.37
CBWD3-205ENST00000469687 NECAB3Q96P71 396 aaPredicted RBP12.77□□□□□ -0.37
CBWD3-205ENST00000469687 HES7Q9BYE0 225 aa12.77□□□□□ -0.37
CBWD3-205ENST00000469687 WNT5BQ9H1J7 359 aa12.77□□□□□ -0.37
CBWD3-205ENST00000469687 LOC105371267A0A1B0GV96 52 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 A0A1W2PNU3 283 aaPredicted RBP12.76□□□□□ -0.37
CBWD3-205ENST00000469687 MSGN1A6NI15 193 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 CELA3AP09093 270 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 GFRA1P56159 465 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 SCRN3Q0VDG4 424 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 RPUSD3Q6P087 351 aaKnown RBP12.76□□□□□ -0.37
CBWD3-205ENST00000469687 HSD17B13Q7Z5P4 300 aaPredicted RBP12.76□□□□□ -0.37
CBWD3-205ENST00000469687 SKA3Q8IX90 412 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 MRPS24Q96EL2 167 aaKnown RBP12.76□□□□□ -0.37
CBWD3-205ENST00000469687 ARPC5LQ9BPX5 153 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 ARRDC1-AS1Q9H2J1 176 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 OR5AC2Q9NZP5 309 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 FOXJ2Q9P0K8 574 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 IGKV1-12A0A0C4DH73 117 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 C9orf172C9J069 976 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 IGKV1D-12P01611 117 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 SERPINA7P05543 415 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 OPRM1P35372 400 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 PTGER4P35408 488 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 ZNF92Q03936 586 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 RSU1Q15404 277 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 KRTAP27-1Q3LI81 207 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 TMEM17Q86X19 198 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 THOC3Q96J01 351 aaKnown RBP12.76□□□□□ -0.37
CBWD3-205ENST00000469687 OR2H1Q9GZK4 316 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 LIME1Q9H400 295 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 GPR35Q9HC97 309 aa12.76□□□□□ -0.37
CBWD3-205ENST00000469687 SHANK1Q9Y566 2161 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 KRBOX1C9JBD0 128 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 ZNF587BE7ETH6 402 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 PPIAP62937 165 aaKnown RBP12.75□□□□□ -0.37
CBWD3-205ENST00000469687 SRYQ05066 204 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 BTN1A1Q13410 526 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 SNTB1Q13884 538 aaKnown RBP12.75□□□□□ -0.37
CBWD3-205ENST00000469687 PIGYQ3MUY2 71 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 PXDC1Q5TGL8 231 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 BATF2Q8N1L9 274 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 OR51F2Q8NH61 342 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 SPSB1Q96BD6 273 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 SIGLEC12Q96PQ1 595 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 ZNF2Q9BSG1 426 aaPredicted RBP12.75□□□□□ -0.37
CBWD3-205ENST00000469687 SHARPINQ9H0F6 387 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 RAB18Q9NP72 206 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 ACKR4Q9NPB9 350 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 LRFN1Q9P244 771 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 AK3Q9UIJ7 227 aa12.75□□□□□ -0.37
CBWD3-205ENST00000469687 TRBV6-7A0A0A0MS04 114 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 CSTBP04080 98 aaKnown RBP12.74□□□□□ -0.37
CBWD3-205ENST00000469687 HOXB5P09067 269 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 FAM3AP98173 230 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 PDCD1Q15116 288 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 C9orf135Q5VTT2 229 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 SULT4A1Q9BR01 284 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 METTL9Q9H1A3 318 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 METTL8Q9H825 291 aaKnown RBP12.74□□□□□ -0.37
CBWD3-205ENST00000469687 LOC400499M0QZD8 3231 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 ASPMQ8IZT6 3477 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 A0A0B4J2A0 478 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 FAM221AA4D161 298 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 GEMIN2O14893 280 aaKnown RBP12.74□□□□□ -0.37
CBWD3-205ENST00000469687 CYTIPO60759 359 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 NRASP01111 189 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 JMJD7P0C870 316 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 EDN3P14138 238 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 MPLP40238 635 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 PAN3Q58A45 887 aaKnown RBP12.74□□□□□ -0.37
CBWD3-205ENST00000469687 TSPO2Q5TGU0 170 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 EIF4E3Q8N5X7 224 aaKnown RBP12.74□□□□□ -0.37
CBWD3-205ENST00000469687 CPEB3Q8NE35 698 aaKnown RBP12.74□□□□□ -0.37
CBWD3-205ENST00000469687 PIK3IP1Q96FE7 263 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 BORCS8Q96FH0 119 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 SCGB3A2Q96PL1 93 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 SHPKQ9UHJ6 478 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 TIMM10BQ9Y5J6 103 aa12.74□□□□□ -0.37
CBWD3-205ENST00000469687 FAM186AA6NE01 2351 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 hCG_38984A0A1B0GV85 526 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 NEURL1O76050 574 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 SFTPBP07988 381 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 CNR1P21554 472 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 RBP2P50120 134 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 RAB32Q13637 225 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 CDCP2Q5VXM1 449 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 DBX2Q6ZNG2 339 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 CCDC54Q8NEL0 328 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 TAAR9Q96RI9 348 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 SPRY4Q9C004 299 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 CYTL1Q9NRR1 136 aa12.73□□□□□ -0.37
CBWD3-205ENST00000469687 GSKIPQ9P0R6 139 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms