RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 K7EPK0 472 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 ISLRO14498 428 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 PSIP1O75475 530 aaKnown RBP0.06□□□□□ -2.4
SSB-208ENST00000468600 GUCA1CO95843 209 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 KRT14P02533 472 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 GPX1P07203 203 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 HLA-GP17693 338 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 CRABP2P29373 138 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 GBX2P52951 348 aaPredicted RBP0.06□□□□□ -2.4
SSB-208ENST00000468600 SLC18A1P54219 525 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 SLC25A25Q6KCM7 469 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 UNC93AQ86WB7 457 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 MUC15Q8N387 334 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 ZBTB18Q99592 522 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 ZNF251Q9BRH9 671 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 SLC19A3Q9BZV2 496 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 ACTR3CQ9C0K3 210 aaPredicted RBP0.06□□□□□ -2.4
SSB-208ENST00000468600 AGPAT4Q9NRZ5 378 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 U3KQK5 164 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 C2orf16Q68DN1 1984 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 FSIP2Q5CZC0 6907 aa0.06□□□□□ -2.4
SSB-208ENST00000468600 ROS1P08922 2347 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 TSPAN11A1L157 253 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 PLPP3O14495 311 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 NDC80O14777 642 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 CTLA4P16410 223 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 PSMB9P28065 219 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 AP1S2P56377 157 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 RAB11AP62491 216 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 MRPL23Q16540 153 aaKnown RBP0.05□□□□□ -2.4
SSB-208ENST00000468600 TCAIMQ8N3R3 496 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 OR4C16Q8NGL9 310 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 AICDAQ9GZX7 198 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 GABARAPL1Q9H0R8 117 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 TDRD3Q9H7E2 651 aaKnown RBP0.05□□□□□ -2.4
SSB-208ENST00000468600 ACP6Q9NPH0 428 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 ENPP4Q9Y6X5 453 aa0.05□□□□□ -2.4
SSB-208ENST00000468600 TRBV11-1A0A0K0K1C0 115 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 SLC19A2O60779 497 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 CD160O95971 181 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 HLA-AP01891 365 aaKnown RBP0.04□□□□□ -2.4
SSB-208ENST00000468600 CDK1P06493 297 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 MRPL19P49406 292 aaKnown RBP0.04□□□□□ -2.4
SSB-208ENST00000468600 CASP8Q14790 479 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 ELOCQ15369 112 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 SSX2Q16385 188 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 RWDD4Q6NW29 188 aaKnown RBP0.04□□□□□ -2.4
SSB-208ENST00000468600 NOXRED1Q6NXP6 359 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 RGS9BPQ6ZS82 235 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 KRTAP19-3Q7Z4W3 81 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 RAB43Q86YS6 212 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 FAM9BQ8IZU0 186 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 NECAB1Q8N987 351 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 ASZ1Q8WWH4 475 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 RXFP2Q8WXD0 754 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 ELMO1Q92556 727 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 CYSTM1Q9H1C7 97 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 PRORYQ9H606 182 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 TAC3Q9UHF0 121 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 NDRG2Q9UN36 371 aaKnown RBP0.04□□□□□ -2.4
SSB-208ENST00000468600 PLEKHG2Q9H7P9 1386 aa0.04□□□□□ -2.4
SSB-208ENST00000468600 F5H5P2 479 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 F5H5T6 163 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 TP53I11O14683 189 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 ZBTB5O15062 677 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 MYL2P10916 166 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 MLNP12872 115 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 NCF2P19878 526 aaPredicted RBP0.03□□□□□ -2.4
SSB-208ENST00000468600 BCL2A1Q16548 175 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 HSDL1Q3SXM5 330 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 CCDC183Q5T5S1 534 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 OR2T5Q6IEZ7 315 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 ZCCHC24Q8N2G6 241 aaKnown RBP0.03□□□□□ -2.4
SSB-208ENST00000468600 OR5C1Q8NGR4 320 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 OR2T29Q8NH02 315 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 RAB1CQ92928 201 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 XPO6Q96QU8 1125 aaKnown RBP0.03□□□□□ -2.4
SSB-208ENST00000468600 CENPKQ9BS16 269 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 STMN4Q9H169 189 aaPredicted RBP0.03□□□□□ -2.4
SSB-208ENST00000468600 OR5V1Q9UGF6 321 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 PPIL1Q9Y3C6 166 aa0.03□□□□□ -2.4
SSB-208ENST00000468600 TRGV2A0A075B6R0 118 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 HUS1O60921 280 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 UPK1BO75841 260 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 OXTP01178 125 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 BCKDHBP21953 392 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 RFC3P40938 356 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 GABRA4P48169 554 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 SERPINB8P50452 374 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 TFDP2Q14188 446 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 ITIH4Q14624 930 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 SELENOHQ8IZQ5 122 aaKnown RBP0.02□□□□□ -2.41
SSB-208ENST00000468600 VKORC1L1Q8N0U8 176 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 SLC25A45Q8N413 288 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 TTC29Q8NA56 475 aaPredicted RBP0.02□□□□□ -2.41
SSB-208ENST00000468600 DYNLL2Q96FJ2 89 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 RCL1Q9Y2P8 373 aaKnown RBP0.02□□□□□ -2.41
SSB-208ENST00000468600 MICAL3Q7RTP6 2002 aa0.02□□□□□ -2.41
SSB-208ENST00000468600 SMCO3A2RU48 225 aa0.01□□□□□ -2.41
SSB-208ENST00000468600 CXCL11O14625 94 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms