RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 RASL12Q9NYN1 266 aa12.53□□□□□ -0.4
ATG4B-215ENST00000468018 DNAJB11Q9UBS4 358 aa12.53□□□□□ -0.4
ATG4B-215ENST00000468018 IGKV1-27A0A075B6S5 117 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 TRAV40A0A0B4J280 105 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 OR4C45A6NMZ5 311 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 OR2AT4A6NND4 320 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 FADS2O95864 444 aaKnown RBP12.52□□□□□ -0.41
ATG4B-215ENST00000468018 PSG2P11465 335 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 CAV3P56539 151 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 FGF12P61328 243 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 ERVK11-1P61568 191 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 ADARB1P78563 741 aaKnown RBP12.52□□□□□ -0.41
ATG4B-215ENST00000468018 OGFRL1Q5TC84 451 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-215ENST00000468018 TMEM244Q5VVB8 128 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 RDH10Q8IZV5 341 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 ZNF555Q8NEP9 628 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 OR52I1Q8NGK6 324 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 C22orf15Q8WYQ4 148 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 ST8SIA4Q92187 359 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 TMIGD2Q96BF3 282 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 SDSLQ96GA7 329 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 JMJD8Q96S16 334 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 NRIP2Q9BQI9 281 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 DCTN5Q9BTE1 182 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 PRDM13Q9H4Q3 707 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 FGF20Q9NP95 211 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-215ENST00000468018 RPL36Q9Y3U8 105 aaKnown RBP12.52□□□□□ -0.41
ATG4B-215ENST00000468018 MAB21L2Q9Y586 359 aa12.52□□□□□ -0.41
ATG4B-215ENST00000468018 NDUFB3O43676 98 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 GATBO75879 557 aaKnown RBP12.51□□□□□ -0.41
ATG4B-215ENST00000468018 CLIC3O95833 236 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 TFF1P04155 84 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 SFTPBP07988 381 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 HTR1AP08908 422 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 BPIFB3P59826 476 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 GMFBP60983 142 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 IL13RA1P78552 427 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 IL24Q13007 206 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 ALKBH1Q13686 389 aaKnown RBP12.51□□□□□ -0.41
ATG4B-215ENST00000468018 SMN1Q16637 294 aaKnown RBP12.51□□□□□ -0.41
ATG4B-215ENST00000468018 LRRC36Q1X8D7 754 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 UTS2BQ765I0 119 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 LHFPL3Q86UP9 236 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-215ENST00000468018 RPS4Y2Q8TD47 263 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 FAM216AQ8WUB2 273 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 PP6455Q8WZ26 134 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 ADAT3Q96EY9 351 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-215ENST00000468018 MED30Q96HR3 178 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 C1orf147Q96MC9 270 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-215ENST00000468018 WDFY2Q96P53 400 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 MYCBPQ99417 103 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-215ENST00000468018 ISG20L2Q9H9L3 353 aaKnown RBP12.51□□□□□ -0.41
ATG4B-215ENST00000468018 PLEKHA1Q9HB21 404 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 POLDIP2Q9Y2S7 368 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 KPTNQ9Y664 436 aa12.51□□□□□ -0.41
ATG4B-215ENST00000468018 IGKV1-9A0A0C4DH69 117 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 NKX6-3A6NJ46 265 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 ANKRD65E5RJM6 399 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 H3BSH0 61 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 J3QLW9 94 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 RGS9O75916 674 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-215ENST00000468018 LIMS3P0CW19 117 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 LIMS4P0CW20 117 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 ZNF19P17023 458 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 MRPL28Q13084 256 aaKnown RBP12.5□□□□□ -0.41
ATG4B-215ENST00000468018 IKZF1Q13422 519 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 LRRC10Q5BKY1 277 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 TTC23Q5W5X9 447 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 SIGLECL1Q8N7X8 197 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 DNAAF1Q8NEP3 725 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 OR10AC1Q8NH08 325 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 MRPL48Q96GC5 212 aaKnown RBP12.5□□□□□ -0.41
ATG4B-215ENST00000468018 ZNF488Q96MN9 340 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 ADI1Q9BV57 179 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 CNTD2Q9H8S5 307 aa12.5□□□□□ -0.41
ATG4B-215ENST00000468018 SLC25A10Q9UBX3 287 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-215ENST00000468018 SOX21Q9Y651 276 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-215ENST00000468018 CENPVL3A0A0U1RRI6 287 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 TRIM77I1YAP6 450 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 TOX4O94842 621 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 FUT6P51993 359 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 UBA52P62987 128 aaKnown RBP12.49□□□□□ -0.41
ATG4B-215ENST00000468018 IL18R1Q13478 541 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 SMIM21Q3B7S5 101 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 KLHL22Q53GT1 634 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 METTL11BQ5VVY1 283 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 CRIP3Q6Q6R5 217 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 METAP1DQ6UB28 335 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-215ENST00000468018 ANGPTL5Q86XS5 388 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 CD177Q8N6Q3 437 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 KIR3DL3Q8N743 410 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 OR51A4Q8NGJ6 313 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 CNIH3Q8TBE1 160 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 TRMT10AQ8TBZ6 339 aaKnown RBP12.49□□□□□ -0.41
ATG4B-215ENST00000468018 HAVCR2Q8TDQ0 301 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 FBLIM1Q8WUP2 373 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 MS4A7Q9GZW8 240 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-215ENST00000468018 MTCH1Q9NZJ7 389 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 HHLA2Q9UM44 414 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms