RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 DMKNQ6E0U4 476 aaPredicted RBP7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 XAF1Q6GPH4 301 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 ZNF529Q6P280 563 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 HAGHLQ6PII5 290 aaPredicted RBP7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 KCTD8Q6ZWB6 473 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 PARP16Q8N5Y8 322 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 TEX29Q8N6K0 151 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 ZNF676Q8N7Q3 588 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 DEFB108BQ8NET1 73 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 OR51A4Q8NGJ6 313 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 OR5AK2Q8NH90 309 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 ANGPTL6Q8NI99 470 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 RGP1Q92546 391 aaPredicted RBP7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 DMRTB1Q96MA1 342 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 PDCD1LG2Q9BQ51 273 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 NRIP2Q9BQI9 281 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 WDR13Q9H1Z4 485 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 PLEKHA1Q9HB21 404 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 MMP26Q9NRE1 261 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 CLN8Q9UBY8 286 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 ZNF222Q9UK12 451 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 SLC7A11Q9UPY5 501 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 POLDIP2Q9Y2S7 368 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 SIRT4Q9Y6E7 314 aaPredicted RBP7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 IGHV3OR15-7A0A075B7D8 119 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 IGHV2-70DA0A0C4DH43 119 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 TRBV2A0A0J9YWF9 115 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 KIR2DS1A0A191URI9 304 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 SLC1A7O00341 560 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 AKR7A2O43488 359 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 ADAM20O43506 726 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 SYNGR1O43759 233 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 LALBAP00709 142 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 GYPAP02724 150 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 CDK1P06493 297 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 SRD5A1P18405 259 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 ATF1P18846 271 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 PRKACBP22694 351 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 C21orf33P30042 268 aaPredicted RBP7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 VHLP40337 213 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 HAAOP46952 286 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 SLC35A2P78381 396 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 IRF3Q14653 427 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 CNN3Q15417 329 aaKnown RBP7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 DMRTC1Q5HYR2 192 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 CRIP3Q6Q6R5 217 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 IZUMO2Q6UXV1 221 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 ZNF788Q6ZQV5 615 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 AHSA2Q719I0 299 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 ZNF771Q7L3S4 317 aaPredicted RBP7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 C1QL2Q7Z5L3 287 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 CALHM1Q8IU99 346 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 NANOGP1Q8N7R0 232 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 BOLLQ8N9W6 283 aaKnown RBP7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 BPIFB6Q8NFQ5 453 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 RAB40AQ8WXH6 277 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 SPSB1Q96BD6 273 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 FGGYQ96C11 551 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 SMIM19Q96E16 107 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 SEH1LQ96EE3 360 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 CDCA4Q9BXL8 241 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 COMMD4Q9H0A8 199 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 DUSP21Q9H596 190 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 SEBOXQ9HB31 216 aaPredicted RBP7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 SMURF1Q9HCE7 757 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 CHCHD3Q9NX63 227 aaKnown RBP7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 NLKQ9UBE8 527 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 OR5V1Q9UGF6 321 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 RAB26Q9ULW5 256 aa7.87□□□□□ -1.15
SDCCAG3-208ENST00000466579 IGKV1D-17A0A075B6S4 117 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 LOC105371242A0A075B767 164 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 TRBV5-5A0A0J9YX44 114 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 OR2AT4A6NND4 320 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 C22orf46C9J442 243 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 H3BSH0 61 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 GPR37O15354 613 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 SIGLEC5O15389 551 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 ECDO95905 644 aaPredicted RBP7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 PSG2P11465 335 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 ZNF20P17024 532 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 GLRA1P23415 457 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 RBP2P50120 134 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 WNT4P56705 351 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 TAS2R43P59537 309 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 RPS11P62280 158 aaKnown RBP eCLIP7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 BDH1Q02338 343 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 ACSM1Q08AH1 577 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 DOC2BQ14184 412 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 CD276Q5ZPR3 534 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 ASPHD2Q6ICH7 369 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 FAHD2BQ6P2I3 314 aaPredicted RBP7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 ACP7Q6ZNF0 438 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 LHFPL2Q6ZUX7 228 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 IL17RELQ6ZVW7 336 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 SLC36A1Q7Z2H8 476 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 ANGPTL5Q86XS5 388 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 STX19Q8N4C7 294 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 LY6G5BQ8NDX9 201 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 OR13C3Q8NGS6 347 aa7.86□□□□□ -1.15
SDCCAG3-208ENST00000466579 GPR148Q8TDV2 347 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms