RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 IL24Q13007 206 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 ASPHD2Q6ICH7 369 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 ZNF529Q6P280 563 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 ZNF841Q6ZN19 808 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 PRSS48Q7RTY5 328 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 ZFP41Q8N8Y5 198 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 POC1AQ8NBT0 407 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 ZNF671Q8TAW3 534 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 NPRL2Q8WTW4 380 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 TSEN15Q8WW01 171 aaKnown RBP16.95■□□□□ 0.3
SKA3-205ENST00000465471 GHSRQ92847 366 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 SEH1LQ96EE3 360 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 ZCCHC4Q9H5U6 513 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 HIF1ANQ9NWT6 349 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 KAAG1Q9UBP8 84 aa16.95■□□□□ 0.3
SKA3-205ENST00000465471 ARHGAP32A7KAX9 2087 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 IGHV3OR15-7A0A075B7D8 119 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 PPIAL4CA0A0B4J2A2 164 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 TRBV5-5A0A0J9YX44 114 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 FAM230AA0A1W2PPH8 454 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 FOXH1O75593 365 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 MICBQ29980 383 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 STUMQ69YW2 141 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 CRIP3Q6Q6R5 217 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 NLRC3Q7RTR2 1065 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 SERPINA12Q8IW75 414 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 OR8B3Q8NGG8 313 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 OR13C9Q8NGT0 318 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 BORCS8Q96FH0 119 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 OR5M11Q96RB7 305 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 OR8B2Q96RD0 313 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 NRIP2Q9BQI9 281 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 BLOC1S6Q9UL45 172 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 POLDIP2Q9Y2S7 368 aa16.94■□□□□ 0.3
SKA3-205ENST00000465471 DOCK11Q5JSL3 2073 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 NAV3Q8IVL0 2385 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 FCN3O75636 299 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 GYPAP02724 150 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 AMY2BP19961 511 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 PRKACBP22694 351 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 PITPNBP48739 271 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 RBP2P50120 134 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 ERVK11-1P61568 191 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 SPHARQ15513 63 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 ESCO2Q56NI9 601 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 YIF1BQ5BJH7 314 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 ATPAF1Q5TC12 328 aaPredicted RBP16.93■□□□□ 0.3
SKA3-205ENST00000465471 LHFPL2Q6ZUX7 228 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 ANGPTL5Q86XS5 388 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 OR5D14Q8NGL3 314 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 OR13C5Q8NGS8 318 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 DACT3Q96B18 629 aaPredicted RBP16.93■□□□□ 0.3
SKA3-205ENST00000465471 OPALINQ96PE5 141 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 SSBP3Q9BWW4 388 aaPredicted RBP16.93■□□□□ 0.3
SKA3-205ENST00000465471 HES4Q9HCC6 221 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 RASL12Q9NYN1 266 aa16.93■□□□□ 0.3
SKA3-205ENST00000465471 SULT1B1O43704 296 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 CRLF1O75462 422 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 OCM2P0CE71 109 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 CELP19835 753 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 GLRA1P23415 457 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 GABARAPL2P60520 117 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 LCN2P80188 198 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 PAX2Q02962 417 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 ANGPTL6Q8NI99 470 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 TMEM106AQ96A25 262 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 DNTTIP1Q9H147 329 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 NLKQ9UBE8 527 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 ZNF222Q9UK12 451 aa16.92■□□□□ 0.3
SKA3-205ENST00000465471 PHF1O43189 567 aaPredicted RBP16.91■□□□□ 0.3
SKA3-205ENST00000465471 ADAM20O43506 726 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 CD2P06729 351 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 HOXB4P17483 251 aaPredicted RBP16.91■□□□□ 0.3
SKA3-205ENST00000465471 PCMT1P22061 227 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 SOX2P48431 317 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 NPY4RP50391 375 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 ATP1B3P54709 279 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 CR1LQ2VPA4 569 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 FAM120AOSQ5T036 256 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 WDR25Q64LD2 544 aaPredicted RBP16.91■□□□□ 0.3
SKA3-205ENST00000465471 ACP7Q6ZNF0 438 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 TMIGD2Q96BF3 282 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 ZNF488Q96MN9 340 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 SMURF1Q9HCE7 757 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 MTCH1Q9NZJ7 389 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 DNAJB11Q9UBS4 358 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 WNK2Q9Y3S1 2297 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 C2CD3Q4AC94 2353 aa16.91■□□□□ 0.3
SKA3-205ENST00000465471 TRBV5-7A0A0A0MS05 114 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 A0A1B0GW55 424 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 TRAPPC2LH3BP13 241 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 DUX4L2P0CJ85 424 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 DUX4L3P0CJ86 424 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 DUX4L4P0CJ87 422 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 DUX4L5P0CJ88 424 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 DUX4L6P0CJ89 424 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 DUX4L7P0CJ90 424 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 GATA3P23771 443 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 MTCP1P56278 107 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 GMFBP60983 142 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms