RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 COPS4Q9BT78 406 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 USE1Q9NZ43 259 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 ZMAT5Q9UDW3 170 aaKnown RBP11.85□□□□□ -0.51
HDAC6-214ENST00000465269 SCOCQ9UIL1 159 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 TBL2Q9Y4P3 447 aaKnown RBP11.85□□□□□ -0.51
HDAC6-214ENST00000465269 FAM90A22PA8MWA6 464 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 FKBP6O75344 327 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 TIPRLO75663 272 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 LY86O95711 162 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 H1F0P07305 194 aaKnown RBP11.84□□□□□ -0.51
HDAC6-214ENST00000465269 RRM2P31350 389 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 PYCR1P32322 319 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 MYCNOSP40205 109 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 MAGEA2P43356 314 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 DLX6P56179 175 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 ACTR3P61158 418 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 SPIBQ01892 262 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 PPP1R8Q12972 351 aaKnown RBP11.84□□□□□ -0.51
HDAC6-214ENST00000465269 ZNF626Q68DY1 528 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 CD177Q8N6Q3 437 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 OR2T27Q8NH04 317 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 ZNRF4Q8WWF5 429 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 SPSB4Q96A44 273 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 REEP6Q96HR9 211 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 RAX2Q96IS3 184 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 ERMAPQ96PL5 475 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-214ENST00000465269 GPX7Q96SL4 187 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-214ENST00000465269 MICU1Q9BPX6 476 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 CENPMQ9NSP4 180 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 SORL1Q92673 2214 aa11.84□□□□□ -0.51
HDAC6-214ENST00000465269 hCG_38984A0A1B0GV85 526 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 PSMB11A5LHX3 300 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 OR6C68A6NDL8 312 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 ZNF850A8MQ14 1090 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 GADD45GO95257 159 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 TXNDC12O95881 172 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 CST1P01037 141 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 HIST1H1CP16403 213 aaKnown RBP11.83□□□□□ -0.52
HDAC6-214ENST00000465269 DDOSTP39656 456 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 GSK3AP49840 483 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 DYNLT3P51808 116 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 OR12D2P58182 307 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 SLC36A3Q495N2 470 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 FGD3Q5JSP0 725 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 OR2T5Q6IEZ7 315 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 OSR2Q8N2R0 312 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 OR2T29Q8NH02 315 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 PYDC1Q8WXC3 89 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 SDSLQ96GA7 329 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 ZNF488Q96MN9 340 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 NOL4LQ96MY1 436 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-214ENST00000465269 ZNF319Q9P2F9 582 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 LINC00527Q9UJ94 153 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 AP4S1Q9Y587 144 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 SMAD5-AS1Q9Y6J3 95 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 KIAA1109Q2LD37 5005 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 DNAH10Q8IVF4 4471 aa11.83□□□□□ -0.52
HDAC6-214ENST00000465269 TRBV4-1A0A0J9YWV2 114 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 GNGT2O14610 69 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 DCTDP32321 178 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 SMIM11AP58511 58 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 PRDX4Q13162 271 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 TIGD6Q17RP2 521 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 DPY19L2P2Q6ZN68 376 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 RRM2BQ7LG56 351 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 DCXRQ7Z4W1 244 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 THAP5Q7Z6K1 395 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 RNF113BQ8IZP6 322 aaKnown RBP11.82□□□□□ -0.52
HDAC6-214ENST00000465269 BATF2Q8N1L9 274 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 CYB561A3Q8NBI2 242 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 NDNFQ8TB73 568 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 HPSE2Q8WWQ2 592 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 SLC25A33Q9BSK2 321 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 RTL8AQ9BWD3 113 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 NDEL1Q9GZM8 345 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 EDA2RQ9HAV5 297 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 VNN3Q9NY84 501 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 ZNF256Q9Y2P7 627 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-214ENST00000465269 U3KQV3 271 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 HECTD4Q9Y4D8 3996 aa11.82□□□□□ -0.52
HDAC6-214ENST00000465269 A0A1W2PRQ8 180 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 RFPL4AA6NLU0 287 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 SEC14L6B5MCN3 397 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 RFPL4AL1F8VTS6 287 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 TNFRSF11BO00300 401 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 XRCC2O43543 280 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 RRP9O43818 475 aaKnown RBP11.81□□□□□ -0.52
HDAC6-214ENST00000465269 RENP00797 406 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 ANXA2P07355 339 aaKnown RBP11.81□□□□□ -0.52
HDAC6-214ENST00000465269 FRMD6-AS1P0C7T7 363 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 ACKR3P25106 362 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 AZGP1P25311 298 aaKnown RBP11.81□□□□□ -0.52
HDAC6-214ENST00000465269 RPS6KA3P51812 740 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 DGCR6Q14129 220 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 SEC23BQ15437 767 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 TAF13Q15543 124 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 ZNF770Q6IQ21 691 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-214ENST00000465269 ZBTB46Q86UZ6 589 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 OR11H6Q8NGC7 330 aa11.81□□□□□ -0.52
HDAC6-214ENST00000465269 OR51L1Q8NGJ5 315 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms