RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 CFL2Q9Y281 166 aa0.91□□□□□ -2.26
NUCKS1-202ENST00000464938 ACOT9Q9Y305 439 aa0.91□□□□□ -2.26
NUCKS1-202ENST00000464938 KPTNQ9Y664 436 aa0.91□□□□□ -2.26
NUCKS1-202ENST00000464938 SHANK1Q9Y566 2161 aa0.91□□□□□ -2.26
NUCKS1-202ENST00000464938 ELP1O95163 1332 aa0.9□□□□□ -2.26
NUCKS1-202ENST00000464938 TRIP11Q15643 1979 aa0.9□□□□□ -2.26
NUCKS1-202ENST00000464938 NPHP4O75161 1426 aaPredicted RBP0.9□□□□□ -2.26
NUCKS1-202ENST00000464938 SEC16AO15027 2179 aa0.9□□□□□ -2.26
NUCKS1-202ENST00000464938 CLDN34H7C241 214 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 M0R1B8 84 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 NDUFS5O43920 106 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 ALOX12BO75342 701 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 VAPBO95292 243 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 IGLV7-43P04211 117 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 PFN1P07737 140 aaKnown RBP0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 OR5AC1P0C628 307 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 TEAD1P28347 426 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 TGFBR1P36897 503 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 GALR1P47211 349 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 OR12D2P58182 307 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 RPS11P62280 158 aaKnown RBP eCLIP0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 GRB2P62993 217 aaKnown RBP0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 TRDNQ13061 729 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 KRTAP6-3Q3LI67 103 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 CDNFQ49AH0 187 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 CAVIN4Q5BKX8 364 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 TTC32Q5I0X7 151 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 CLLU1OSQ5K130 101 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 MRPL2Q5T653 305 aaKnown RBP0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 MLIPQ5VWP3 458 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 KCTD16Q68DU8 428 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 CA13Q8N1Q1 262 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 TMEM104Q8NE00 496 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 ZNF555Q8NEP9 628 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 OR4K2Q8NGD2 314 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 ZNF420Q8TAQ5 688 aaPredicted RBP0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 ORAOV1Q8WV07 137 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 MITD1Q8WV92 249 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 TNFRSF14Q92956 283 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 CENPNQ96H22 339 aaPredicted RBP0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 ANP32EQ9BTT0 268 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 MAP1LC3CQ9BXW4 147 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 RDH14Q9HBH5 336 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 ZNF302Q9NR11 478 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 STX18Q9P2W9 335 aaKnown RBP0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 SLC7A11Q9UPY5 501 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 KLF13Q9Y2Y9 288 aaPredicted RBP0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 SVILO95425 2214 aa0.9□□□□□ -2.27
NUCKS1-202ENST00000464938 NOS1P29475 1434 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 ZSWIM8A7E2V4 1837 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 BAZ1BQ9UIG0 1483 aaKnown RBP0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 A0A0G2JMP0 313 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 A0A0X1KG70 313 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 KIR2DS1A0A191URI9 304 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 FAM240AA0A1B0GVK7 77 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 A0A1W2PNN7 141 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 IZUMO1RA6ND01 250 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 C4orf51C9J302 202 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 H7C2Y5 167 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 CNMDO75829 334 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 CD8AP01732 235 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 IGHG2P01859 326 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 MBP02144 154 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 HOXB8P17481 243 aaPredicted RBP0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 LGALS3P17931 250 aaKnown RBP0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 HLA-DMAP28067 261 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 HTR2CP28335 458 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 CD34P28906 385 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 RGS6P49758 472 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 IFFO1Q0D2I5 559 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 DYNC1I2Q13409 638 aaKnown RBP0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 MAPRE2Q15555 327 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 HNRNPA1L2Q32P51 320 aaKnown RBP0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 CLEC12AQ5QGZ9 265 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 DUPD1Q68J44 220 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 WDR59Q6PJI9 974 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 FA2HQ7L5A8 372 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 FAM19A1Q7Z5A9 133 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 PRNTQ86SH4 94 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 FAM58AQ8N1B3 248 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 ARHGAP18Q8N392 663 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 ZNF664Q8N3J9 261 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 ZFP62Q8NB50 900 aaPredicted RBP0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 CYB561A3Q8NBI2 242 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 OR4A15Q8NGL6 344 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 CACNG8Q8WXS5 425 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 FAM131CQ96AQ9 280 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 TMEM159Q96B96 161 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 TVP23CQ96ET8 276 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 Q96MT0 163 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 RILPQ96NA2 401 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 DERL3Q96Q80 235 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 PEBP4Q96S96 227 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 TMED9Q9BVK6 235 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 TBL1XR1Q9BZK7 514 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 COA1Q9GZY4 146 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 SYT4Q9H2B2 425 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 TRIM45Q9H8W5 580 aaPredicted RBP0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 TMEM38BQ9NVV0 291 aa0.89□□□□□ -2.27
NUCKS1-202ENST00000464938 DDIT4Q9NX09 232 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms