RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 ITPR3Q14573 2671 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 IGHV4-39P01824 125 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 IFNA4P05014 189 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 ALOX5APP20292 161 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 HSD11B1P28845 292 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 FGF9P31371 208 aaPredicted RBP9.48□□□□□ -0.89
APTX-209ENST00000460940 RPL35P42766 123 aaKnown RBP9.48□□□□□ -0.89
APTX-209ENST00000460940 SLC6A9P48067 706 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 EFNA4P52798 201 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 MXD1Q05195 221 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 P2RY14Q15391 338 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 NKPD1Q17RQ9 610 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 SPATA46Q5T0L3 261 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 ZNF57Q68EA5 555 aaPredicted RBP9.48□□□□□ -0.89
APTX-209ENST00000460940 KCTD18Q6PI47 426 aaPredicted RBP9.48□□□□□ -0.89
APTX-209ENST00000460940 DEGS2Q6QHC5 323 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 LRP11Q86VZ4 500 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 PCNPQ8WW12 178 aaKnown RBP9.48□□□□□ -0.89
APTX-209ENST00000460940 ADGRL4Q9HBW9 690 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 CYSLTR2Q9NS75 346 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 ZNF275Q9NSD4 429 aaPredicted RBP9.48□□□□□ -0.89
APTX-209ENST00000460940 DNAJC27Q9NZQ0 273 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 COPZ2Q9P299 210 aa9.48□□□□□ -0.89
APTX-209ENST00000460940 NMBP08949 121 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 MRPL3P09001 348 aaKnown RBP9.47□□□□□ -0.89
APTX-209ENST00000460940 H2BFMP0C1H6 154 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 RAC2P15153 192 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 MPV17P39210 176 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 ROM1Q03395 351 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 MALLQ13021 153 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 OPCMLQ14982 345 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 ZNF124Q15973 351 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 FBXW12Q6X9E4 464 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 KRTAP1-3Q8IUG1 177 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 SLC35F2Q8IXU6 374 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 THEM6Q8WUY1 208 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 NEU4Q8WWR8 484 aaPredicted RBP9.47□□□□□ -0.89
APTX-209ENST00000460940 AMELYQ99218 206 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 GAL3ST1Q99999 423 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 DPAGT1Q9H3H5 408 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 ZCCHC4Q9H5U6 513 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 OPA3Q9H6K4 179 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 BIN3Q9NQY0 253 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 TAAR3PQ9P1P4 343 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 MYEF2Q9P2K5 600 aaKnown RBP9.47□□□□□ -0.89
APTX-209ENST00000460940 GSTK1Q9Y2Q3 226 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 STARD10Q9Y365 291 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 RPL36Q9Y3U8 105 aaKnown RBP9.47□□□□□ -0.89
APTX-209ENST00000460940 ARFGEF3Q5TH69 2177 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 MAP1AP78559 2803 aaPredicted RBP9.47□□□□□ -0.89
APTX-209ENST00000460940 PLSCR5A0PG75 271 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 H7C2Y5 167 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 HPGDSO60760 199 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 ENTPD6O75354 484 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 LCATP04180 440 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 SBK2P0C263 348 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 SELEP16581 610 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 KITLGP21583 273 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 ALDH3B1P43353 468 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 CX3CR1P49238 355 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 AKR1D1P51857 326 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 PCGF3Q3KNV8 242 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 C22orf42Q6IC83 251 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.47□□□□□ -0.89
APTX-209ENST00000460940 ZNF283Q8N7M2 679 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 ZNF565Q8N9K5 539 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 OR51G2Q8NGK0 314 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 VRK1Q99986 396 aaPredicted RBP9.47□□□□□ -0.89
APTX-209ENST00000460940 MYOZ1Q9NP98 299 aaPredicted RBP9.47□□□□□ -0.89
APTX-209ENST00000460940 KLHDC2Q9Y2U9 406 aa9.47□□□□□ -0.89
APTX-209ENST00000460940 PDCD5O14737 125 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 TIMM8AO60220 97 aaPredicted RBP9.46□□□□□ -0.9
APTX-209ENST00000460940 SSX5O60225 188 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 F12P00748 615 aaPredicted RBP9.46□□□□□ -0.9
APTX-209ENST00000460940 DCTDP32321 178 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 BTCP35070 178 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 ATP6V1E1P36543 226 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 MTNR1AP48039 350 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 PRKXP51817 358 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 DSCR9P59020 149 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 PSMA6P60900 246 aaKnown RBP9.46□□□□□ -0.9
APTX-209ENST00000460940 ACTC1P68032 377 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 ACTA1P68133 377 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 EGR3Q06889 387 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 PSG7Q13046 419 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 TPBGQ13641 420 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 LIPKQ5VXJ0 399 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 CD200R1LQ6Q8B3 271 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 SCARB1Q8WTV0 552 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 ACOT12Q8WYK0 555 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 RFT1Q96AA3 541 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 HAVCR1Q96D42 359 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 POFUT1Q9H488 388 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 NKIRAS2Q9NYR9 191 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 COMMD3Q9UBI1 195 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 CLEC2DQ9UHP7 191 aa9.46□□□□□ -0.9
APTX-209ENST00000460940 FLNAP21333 2647 aaKnown RBP9.46□□□□□ -0.9
APTX-209ENST00000460940 C17orf100A8MU93 164 aa9.45□□□□□ -0.9
APTX-209ENST00000460940 LINC00587B1AMM8 73 aa9.45□□□□□ -0.9
APTX-209ENST00000460940 G3V3Q6 166 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms