RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 ABHD6Q9BV23 337 aa13.83□□□□□ -0.19
CMTM3-203ENST00000460097 NXF5Q9H1B4 397 aaKnown RBP13.83□□□□□ -0.19
CMTM3-203ENST00000460097 G6PC2Q9NQR9 355 aa13.83□□□□□ -0.19
CMTM3-203ENST00000460097 LRP12Q9Y561 859 aa13.83□□□□□ -0.19
CMTM3-203ENST00000460097 DMRT1Q9Y5R6 373 aa13.83□□□□□ -0.19
CMTM3-203ENST00000460097 NEURL1O76050 574 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 JTBO76095 146 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 OR6A2O95222 327 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 IL33O95760 270 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 HKR1P10072 659 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 CRABP1P29762 137 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 HAAOP46952 286 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 RAB1AP62820 205 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 RHEBQ15382 184 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 DNLZQ5SXM8 178 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 ZNF529Q6P280 563 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 OR51A2Q8NGJ7 313 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 PHOSPHO1Q8TCT1 267 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 CLCC1Q96S66 551 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 TXNIPQ9H3M7 391 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 TAF9BQ9HBM6 251 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 SLC5A6Q9Y289 635 aa13.83□□□□□ -0.2
CMTM3-203ENST00000460097 SPTA1P02549 2419 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 LOC107986453A0A1B0GWG9 222 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 FRG2CA6NGY1 282 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 MSGN1A6NI15 193 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 ZNF729A6NN14 1252 aaPredicted RBP13.82□□□□□ -0.2
CMTM3-203ENST00000460097 TMEM14DPA8MWL7 114 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 MED6O75586 246 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 PRB1P04280 392 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 CSN2P05814 226 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 CD46P15529 392 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 CPT2P23786 658 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 SSTP61278 116 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 UNC119Q13432 240 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 SURF2Q15527 256 aaPredicted RBP13.82□□□□□ -0.2
CMTM3-203ENST00000460097 NNATQ16517 81 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 RBMS3Q6XE24 437 aaKnown RBP13.82□□□□□ -0.2
CMTM3-203ENST00000460097 ACBD4Q8NC06 268 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 MDS2Q8NDY4 140 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 OR4K15Q8NH41 348 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 TMEM230Q96A57 120 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 ARV1Q9H2C2 271 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 SMDT1Q9H4I9 107 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 OR52A1Q9UKL2 312 aa13.82□□□□□ -0.2
CMTM3-203ENST00000460097 A0A1B0GW64 132 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 AP4M1O00189 453 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 SCDO00767 359 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 SP1P08047 785 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 SPARCP09486 303 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 FOSL1P15407 271 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 RAB5AP20339 215 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 RPS27P42677 84 aaKnown RBP13.81□□□□□ -0.2
CMTM3-203ENST00000460097 PPT1P50897 306 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 MMP16P51512 607 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 SUCLG1P53597 346 aaKnown RBP13.81□□□□□ -0.2
CMTM3-203ENST00000460097 FABP9Q0Z7S8 132 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 EIF2B1Q14232 305 aaKnown RBP13.81□□□□□ -0.2
CMTM3-203ENST00000460097 ZNF766Q5HY98 468 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 CLEC18BQ6UXF7 455 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 LHFPL1Q86WI0 220 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 ZNF563Q8TA94 476 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 MARCH1Q8TCQ1 289 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 SGCZQ96LD1 299 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 C5orf34Q96MH7 638 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 C5orf66Q9H5L9 145 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 CNTD2Q9H8S5 307 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 ZMAT3Q9HA38 289 aaKnown RBP13.81□□□□□ -0.2
CMTM3-203ENST00000460097 OR5AC2Q9NZP5 309 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 SMAD9O15198 467 aaKnown RBP13.81□□□□□ -0.2
CMTM3-203ENST00000460097 HLA-DQA2P01906 255 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 CD80P33681 288 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 RAB5CP51148 216 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 GLO1Q04760 184 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 SPOCK1Q08629 439 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 CD226Q15762 336 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 HIST2H3AQ71DI3 136 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 SLC35D2Q76EJ3 337 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 PRR22Q8IZ63 422 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 ZNF843Q8N446 348 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 GVQW1Q8N7I0 195 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 SPACA9Q96E40 222 aaPredicted RBP13.81□□□□□ -0.2
CMTM3-203ENST00000460097 LUZP4Q9P127 313 aa13.81□□□□□ -0.2
CMTM3-203ENST00000460097 OR8U8P0C7N1 319 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 VSIG8P0DPA2 414 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 HPGDP15428 266 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 ZNF14P17017 642 aaPredicted RBP13.8□□□□□ -0.2
CMTM3-203ENST00000460097 ACKR3P25106 362 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 ECI1P42126 302 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 PLCXD2Q0VAA5 305 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 OR52W1Q6IF63 320 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 RPUSD3Q6P087 351 aaKnown RBP13.8□□□□□ -0.2
CMTM3-203ENST00000460097 Q8NA96 180 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 TMEM178AQ8NBL3 297 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 UBAC2Q8NBM4 344 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 EDARADDQ8WWZ3 215 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 NAA11Q9BSU3 229 aaPredicted RBP13.8□□□□□ -0.2
CMTM3-203ENST00000460097 OPA3Q9H6K4 179 aa13.8□□□□□ -0.2
CMTM3-203ENST00000460097 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.8□□□□□ -0.2
CMTM3-203ENST00000460097 GHRLQ9UBU3 117 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms