RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TNXAQ16473 311 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 GOLGA7BQ2TAP0 167 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 KHDRBS2Q5VWX1 349 aaKnown RBP3.25□□□□□ -1.89
CCDC50-203ENST00000460064 THOC7Q6I9Y2 204 aaKnown RBP3.25□□□□□ -1.89
CCDC50-203ENST00000460064 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 CD300LGQ6UXG3 332 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 RTL4Q6ZR62 310 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 SHISA6Q6ZSJ9 500 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 LINC00336Q6ZUF6 198 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 NECAP1Q8NC96 275 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 C19orf18Q8NEA5 215 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 OR1J4Q8NGS1 313 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 RXFP4Q8TDU9 374 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 ESR2Q92731 530 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 FAM131CQ96AQ9 280 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 SNF8Q96H20 258 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 OR10C1Q96KK4 312 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 TBL1YQ9BQ87 522 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 SRRQ9GZT4 340 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 TOLLIPQ9H0E2 274 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 OR51B6Q9H340 312 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 CENPHQ9H3R5 247 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 ARMC7Q9H6L4 198 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 METTL8Q9H825 291 aaKnown RBP3.25□□□□□ -1.89
CCDC50-203ENST00000460064 FBXO8Q9NRD0 319 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 NXT1Q9UKK6 140 aaKnown RBP3.25□□□□□ -1.89
CCDC50-203ENST00000460064 HES2Q9Y543 173 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 LRPPRCP42704 1394 aaKnown RBP3.25□□□□□ -1.89
CCDC50-203ENST00000460064 IGKV1-27A0A075B6S5 117 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 PGRMC1O00264 195 aaKnown RBP3.24□□□□□ -1.89
CCDC50-203ENST00000460064 TAAR5O14804 337 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 LIN7AO14910 233 aaPredicted RBP3.24□□□□□ -1.89
CCDC50-203ENST00000460064 PSIP1O75475 530 aaKnown RBP3.24□□□□□ -1.89
CCDC50-203ENST00000460064 SERPINB7O75635 380 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 CCNKO75909 580 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 FADS2O95864 444 aaKnown RBP3.24□□□□□ -1.89
CCDC50-203ENST00000460064 CCNE2O96020 404 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 PTHP01270 115 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 IFNA6P05013 189 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 GP1BAP07359 652 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 MSNP26038 577 aaKnown RBP3.24□□□□□ -1.89
CCDC50-203ENST00000460064 LOXP28300 417 aaPredicted RBP3.24□□□□□ -1.89
CCDC50-203ENST00000460064 UGT2B10P36537 528 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 TGM4P49221 684 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 GNG10P50151 68 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 RPL10AP62906 217 aaKnown RBP3.24□□□□□ -1.89
CCDC50-203ENST00000460064 IFFO1Q0D2I5 559 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 ALX1Q15699 326 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 OR2W3Q7Z3T1 314 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 SYS1Q8N2H4 156 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 CCNYL1Q8N7R7 359 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 WDR31Q8NA23 367 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 OR5D18Q8NGL1 313 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 CIRBP-AS1Q8TBR5 109 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 GHSRQ92847 366 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 RAD51AP1Q96B01 352 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 TEAD3Q99594 435 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 RNF5Q99942 180 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 ZNF442Q9H7R0 627 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 EXOSC4Q9NPD3 245 aaKnown RBP3.24□□□□□ -1.89
CCDC50-203ENST00000460064 CES1P1Q9UKY3 287 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 PEG3Q9GZU2 1588 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 CABIN1Q9Y6J0 2220 aa3.24□□□□□ -1.89
CCDC50-203ENST00000460064 PLA2R1Q13018 1463 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 AHDC1Q5TGY3 1603 aaPredicted RBP3.23□□□□□ -1.89
CCDC50-203ENST00000460064 A0A1W2PRF3 423 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 A0A1W2PRM7 423 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 LRCOL1A6NCL2 159 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 OR5H1A6NKK0 313 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 M0QXV9 152 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 SC5DO75845 299 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 PTTG1O95997 202 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 IL6P05231 212 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 SLC35E2BP0CK96 405 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 ZNF7P17097 686 aaPredicted RBP3.23□□□□□ -1.89
CCDC50-203ENST00000460064 IL1RNP18510 177 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 ME2P23368 584 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 G0S2P27469 103 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 HLA-DMAP28067 261 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 PSMB5P28074 263 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 PCK1P35558 622 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 ARL2P36404 184 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 MAGEA6P43360 314 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 TAS2R39P59534 338 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 AP3S2P59780 193 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 PAFAH1B2P68402 229 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 IFITM3Q01628 133 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 TSPAN31Q12999 210 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 ZBTB6Q15916 424 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 UAP1Q16222 522 aaPredicted RBP3.23□□□□□ -1.89
CCDC50-203ENST00000460064 COX19Q49B96 90 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 YIF1BQ5BJH7 314 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 RNASE13Q5GAN3 156 aaKnown RBP3.23□□□□□ -1.89
CCDC50-203ENST00000460064 APOBEC3HQ6NTF7 200 aaKnown RBP3.23□□□□□ -1.89
CCDC50-203ENST00000460064 OPN5Q6U736 354 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 TMPRSS11AQ6ZMR5 421 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 ITPRIPQ8IWB1 547 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 ZNF645Q8N7E2 425 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 BAALCQ8WXS3 180 aa3.23□□□□□ -1.89
CCDC50-203ENST00000460064 SLC25A46Q96AG3 418 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms