RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 THAP3Q8WTV1 239 aaPredicted RBP8.75□□□□□ -1.01
UFD1-205ENST00000459854 IL22RA2Q969J5 263 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 TPPP3Q9BW30 176 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 MAP1LC3CQ9BXW4 147 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 SH3BGRL2Q9UJC5 107 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 ZNF391Q9UJN7 358 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 BOKQ9UMX3 212 aaPredicted RBP8.75□□□□□ -1.01
UFD1-205ENST00000459854 WNT11O96014 354 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 TAS2R60P59551 318 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 NR0B2Q15466 257 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 RNASEKQ6P5S7 137 aaKnown RBP8.75□□□□□ -1.01
UFD1-205ENST00000459854 OIT3Q8WWZ8 545 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 DNAJA3Q96EY1 480 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 RSRP1Q9BUV0 290 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 BANF2Q9H503 90 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 METTL1Q9UBP6 276 aaKnown RBP8.75□□□□□ -1.01
UFD1-205ENST00000459854 PRSS50Q9UI38 385 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 HOXC4P09017 264 aaPredicted RBP8.75□□□□□ -1.01
UFD1-205ENST00000459854 SRP14P37108 136 aaKnown RBP8.75□□□□□ -1.01
UFD1-205ENST00000459854 ERHP84090 104 aaKnown RBP8.75□□□□□ -1.01
UFD1-205ENST00000459854 PMS2CLQ68D20 193 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 OR5D18Q8NGL1 313 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 TREM2Q9NZC2 230 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 COA3Q9Y2R0 106 aaPredicted RBP8.75□□□□□ -1.01
UFD1-205ENST00000459854 MYO18AQ92614 2054 aaKnown RBP8.75□□□□□ -1.01
UFD1-205ENST00000459854 DOK2O60496 412 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 PPP1R1AQ13522 171 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 NKAIN2Q5VXU1 208 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 MYPOPQ86VE0 399 aaPredicted RBP8.75□□□□□ -1.01
UFD1-205ENST00000459854 BPIFA4PQ86YQ2 179 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 OR2C3Q8N628 320 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 OR51H1Q8NH63 302 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 EDARADDQ8WWZ3 215 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 POM121Q96HA1 1249 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 CHST11Q9NPF2 352 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 FBXL17Q9UF56 701 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 CDC42EP3Q9UKI2 254 aa8.75□□□□□ -1.01
UFD1-205ENST00000459854 PLPP1O14494 284 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 PDE6DO43924 150 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 MT-ND6P03923 174 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 JMJD7P0C870 316 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 PGA4P0DJD7 388 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 PGA5P0DJD9 388 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 CARD18P57730 90 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 CTBSQ01459 385 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 ABHD17BQ5VST6 288 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 PIGTQ969N2 578 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 TXNIPQ9H3M7 391 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 CDCP1Q9H5V8 836 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 DCAF16Q9NXF7 216 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 LSM2Q9Y333 95 aaKnown RBP8.74□□□□□ -1.01
UFD1-205ENST00000459854 DOCK6Q96HP0 2047 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 NKX6-3A6NJ46 265 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 H0YGG7 62 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 OR7C2O60412 319 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 HAAOP46952 286 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 GNG4P50150 75 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 RFLNAQ6ZTI6 216 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 MRGPRGQ86SM5 289 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 ZNF573Q86YE8 665 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 RBM45Q8IUH3 476 aaKnown RBP8.74□□□□□ -1.01
UFD1-205ENST00000459854 RNF175Q8N4F7 328 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 DOK4Q8TEW6 326 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 SPSB1Q96BD6 273 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 PRDM7Q9NQW5 492 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 UQCR10Q9UDW1 63 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 SLC17A4Q9Y2C5 497 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 MYO10Q9HD67 2058 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 A0A1W2PNV4 684 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 PRSS37A4D1T9 235 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 CDX1P47902 265 aaPredicted RBP8.74□□□□□ -1.01
UFD1-205ENST00000459854 PAX5Q02548 391 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 CD300CQ08708 224 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 IRF3Q14653 427 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 DHRS13Q6UX07 377 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 MED25Q71SY5 747 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 LINC00346Q8IVM7 164 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 ZNF687Q8N1G0 1237 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 TMEM251Q8N6I4 163 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 ST8SIA1Q92185 356 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 DERL3Q96Q80 235 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 TP53RKQ96S44 253 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 GINS3Q9BRX5 216 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 ISG20L2Q9H9L3 353 aaKnown RBP8.74□□□□□ -1.01
UFD1-205ENST00000459854 SLC2A8Q9NY64 477 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 SH2D1BO14796 132 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 ST8SIA5O15466 376 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 CTAG2O75638 210 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 GAPDHP04406 335 aaKnown RBP8.74□□□□□ -1.01
UFD1-205ENST00000459854 CTSDP07339 412 aaPredicted RBP8.74□□□□□ -1.01
UFD1-205ENST00000459854 TBXA2RP21731 343 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 GCSHP23434 173 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 SELENOPP49908 381 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 LIMK1P53667 647 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 IGFBP7Q16270 282 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 DUSP5Q16690 384 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 JMJD6Q6NYC1 403 aaPredicted RBP8.74□□□□□ -1.01
UFD1-205ENST00000459854 ZNF600Q6ZNG1 722 aa8.74□□□□□ -1.01
UFD1-205ENST00000459854 MAML2Q8IZL2 1156 aaPredicted RBP8.74□□□□□ -1.01
UFD1-205ENST00000459854 TP53I13Q8NBR0 393 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms