RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ALKBH1Q13686 389 aaKnown RBP17.21■□□□□ 0.35
VARS-218ENST00000459667 ATPAF1Q5TC12 328 aaPredicted RBP17.21■□□□□ 0.35
VARS-218ENST00000459667 NPRL2Q8WTW4 380 aa17.21■□□□□ 0.35
VARS-218ENST00000459667 TMIGD2Q96BF3 282 aa17.21■□□□□ 0.35
VARS-218ENST00000459667 DNTTIP1Q9H147 329 aa17.21■□□□□ 0.35
VARS-218ENST00000459667 CNOT2Q9NZN8 540 aaKnown RBP17.21■□□□□ 0.35
VARS-218ENST00000459667 SLC7A11Q9UPY5 501 aa17.21■□□□□ 0.35
VARS-218ENST00000459667 POLDIP2Q9Y2S7 368 aa17.21■□□□□ 0.35
VARS-218ENST00000459667 CAB39Q9Y376 341 aaPredicted RBP17.21■□□□□ 0.35
VARS-218ENST00000459667 FBN1P35555 2871 aaKnown RBP17.2■□□□□ 0.34
VARS-218ENST00000459667 FAM230AA0A1W2PPH8 454 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 SYNGR1O43759 233 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 SERPINA3P01011 423 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 CCDC159P0C7I6 412 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 LIMS3P0CW19 117 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 LIMS4P0CW20 117 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 PPIAL4GP0DN37 164 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 PIPP12273 146 aaPredicted RBP17.2■□□□□ 0.34
VARS-218ENST00000459667 AMY2BP19961 511 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 IKZF1Q13422 519 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 UBE2V2Q15819 145 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 ZNF676Q8N7Q3 588 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 POC1AQ8NBT0 407 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 ZNF418Q8TF45 676 aaPredicted RBP17.2■□□□□ 0.34
VARS-218ENST00000459667 FBLIM1Q8WUP2 373 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 PP6455Q8WZ26 134 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 PLCXD1Q9NUJ7 323 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 HHLA2Q9UM44 414 aa17.2■□□□□ 0.34
VARS-218ENST00000459667 OR4C45A6NMZ5 311 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 OR2AT4A6NND4 320 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 NDUFB3O43676 98 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 RGS9O75916 674 aaPredicted RBP17.19■□□□□ 0.34
VARS-218ENST00000459667 ECDO95905 644 aaPredicted RBP17.19■□□□□ 0.34
VARS-218ENST00000459667 TFF1P04155 84 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 ZNF20P17024 532 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 CNN3Q15417 329 aaKnown RBP17.19■□□□□ 0.34
VARS-218ENST00000459667 C11orf91Q3C1V1 193 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 KLF17Q5JT82 389 aaPredicted RBP17.19■□□□□ 0.34
VARS-218ENST00000459667 IZUMO2Q6UXV1 221 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 ZNF788Q6ZQV5 615 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 BTN2A1Q7KYR7 527 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 FGFRL1Q8N441 504 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 BPIFB2Q8N4F0 458 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 BPIFB6Q8NFQ5 453 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 OR10AC1Q8NH08 325 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 ANGPTL6Q8NI99 470 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 GGHQ92820 318 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 UPRTQ96BW1 309 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 ADAT3Q96EY9 351 aaPredicted RBP17.19■□□□□ 0.34
VARS-218ENST00000459667 ZNF488Q96MN9 340 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 GAFA1Q96PS6 74 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 COMMD4Q9H0A8 199 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 RASL12Q9NYN1 266 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 NUP50Q9UKX7 468 aa17.19■□□□□ 0.34
VARS-218ENST00000459667 A0A0A6YYJ9 748 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 TMEM212A6NML5 194 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 LIPFP07098 398 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 PGA5P0DJD9 388 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 SELLP14151 372 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 MPZP25189 248 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 GABRA2P47869 451 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 TGM4P49221 684 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 ETV1P50549 477 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 FUT6P51993 359 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 FGF12P61328 243 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 IL13RA1P78552 427 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 ST3GAL4Q11206 333 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 SMIM21Q3B7S5 101 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 KRTAP24-1Q3LI83 254 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 LRRC10Q5BKY1 277 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 ACP7Q6ZNF0 438 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 ANGPTL5Q86XS5 388 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 CALHM1Q8IU99 346 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 STX19Q8N4C7 294 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 PNLDC1Q8NA58 520 aaKnown RBP17.18■□□□□ 0.34
VARS-218ENST00000459667 OR51A4Q8NGJ6 313 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 OR13C3Q8NGS6 347 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 C22orf15Q8WYQ4 148 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 FGGYQ96C11 551 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 BORCS8Q96FH0 119 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 MED30Q96HR3 178 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 SLC6A7Q99884 636 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 PKIBQ9C010 78 aa17.18■□□□□ 0.34
VARS-218ENST00000459667 IGKV1D-17A0A075B6S4 117 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 TRAV40A0A0B4J280 105 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 E9PI62 339 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 SIGLEC5O15389 551 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 PSG2P11465 335 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 FPR2P25090 351 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 CCDC58Q4VC31 144 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 AHSA2Q719I0 299 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 NRIP2Q9BQI9 281 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 SUCNR1Q9BXA5 334 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 SCN3BQ9NY72 215 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 PSORS1C1Q9UIG5 152 aa17.17■□□□□ 0.34
VARS-218ENST00000459667 RPUSD1Q9UJJ7 312 aaKnown RBP17.17■□□□□ 0.34
VARS-218ENST00000459667 IGKV1-27A0A075B6S5 117 aa17.16■□□□□ 0.34
VARS-218ENST00000459667 ZNF879B4DU55 563 aa17.16■□□□□ 0.34
VARS-218ENST00000459667 GPR37O15354 613 aa17.16■□□□□ 0.34
VARS-218ENST00000459667 XPNPEP2O43895 674 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms