RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 IL36GQ9NZH8 169 aa14.48□□□□□ -0.09
CCDC43-202ENST00000457422 MCTS1Q9ULC4 181 aaKnown RBP14.48□□□□□ -0.09
CCDC43-202ENST00000457422 FAM25EA8MYX2 175 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 SYNGR4O95473 234 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 SERPINA5P05154 406 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 ZNF806P0C7X5 589 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 EDN3P14138 238 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 FUT6P51993 359 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 PLGLB1Q02325 96 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 SIGIRRQ6IA17 410 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 RGS7BPQ6MZT1 257 aaPredicted RBP14.47□□□□□ -0.09
CCDC43-202ENST00000457422 KCTD9Q7L273 389 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 PXT1Q8NFP0 134 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 NMES1Q9C002 83 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 BCO1Q9HAY6 547 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 TMEM9BQ9NQ34 198 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 EDARQ9UNE0 448 aa14.47□□□□□ -0.09
CCDC43-202ENST00000457422 ZNF816-ZNF321PA0A0X1KG74 233 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 hCG_1807616A0A1W2PRN6 198 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 RNF222A6NCQ9 220 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 ZNF724A8MTY0 619 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 I3L521 148 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 SDCBPO00560 298 aaPredicted RBP14.46□□□□□ -0.09
CCDC43-202ENST00000457422 HTR3BO95264 441 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 ECI1P42126 302 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 CHRFAM7AQ494W8 412 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 LRRC37A5PQ49AS3 106 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 NKAPLQ5M9Q1 402 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 RPUSD3Q6P087 351 aaKnown RBP14.46□□□□□ -0.09
CCDC43-202ENST00000457422 CLEC18BQ6UXF7 455 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 ACOT7LQ6ZUV0 252 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 CPEB3Q8NE35 698 aaKnown RBP14.46□□□□□ -0.09
CCDC43-202ENST00000457422 OR5M9Q8NGP3 310 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 MRPS24Q96EL2 167 aaKnown RBP14.46□□□□□ -0.09
CCDC43-202ENST00000457422 FER1L6-AS2Q96M78 137 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 KNTC1P50748 2209 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 MED13Q9UHV7 2174 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 NME2P1O60361 137 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 CRHP06850 196 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 NME2P22392 152 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 SUPT4H1P63272 117 aaKnown RBP14.46□□□□□ -0.09
CCDC43-202ENST00000457422 ARF1P84077 181 aaKnown RBP14.46□□□□□ -0.09
CCDC43-202ENST00000457422 CYCSP99999 105 aaKnown RBP14.46□□□□□ -0.09
CCDC43-202ENST00000457422 C9orf135Q5VTT2 229 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 TUSC5Q8IXB3 177 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 MDS2Q8NDY4 140 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 CALHM2Q9HA72 323 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 RAB18Q9NP72 206 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 ZNF701Q9NV72 531 aaPredicted RBP14.46□□□□□ -0.09
CCDC43-202ENST00000457422 SLC7A11Q9UPY5 501 aa14.46□□□□□ -0.09
CCDC43-202ENST00000457422 KLF13Q9Y2Y9 288 aaPredicted RBP14.46□□□□□ -0.09
CCDC43-202ENST00000457422 BCL2L11O43521 198 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 COX5BP10606 129 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 DTYMKP23919 212 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 SERPINF1P36955 418 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 BAMBIQ13145 260 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 ZSCAN4Q8NAM6 433 aaPredicted RBP14.45□□□□□ -0.1
CCDC43-202ENST00000457422 COQ8AQ8NI60 647 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 THAP6Q8TBB0 222 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 FNDC9Q8TBE3 224 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 ST8SIA2Q92186 375 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 HDHD3Q9BSH5 251 aaPredicted RBP14.45□□□□□ -0.1
CCDC43-202ENST00000457422 REG4Q9BYZ8 158 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 RDH8Q9NYR8 311 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 FREM1Q5H8C1 2179 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 IGKV1D-8A0A087WSZ0 117 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 IGKV1-12A0A0C4DH73 117 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 ZNF587BE7ETH6 402 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 MSTNO14793 375 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 IGKV1D-12P01611 117 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 SP1P08047 785 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 RPS2P15880 293 aaKnown RBP14.45□□□□□ -0.1
CCDC43-202ENST00000457422 PI3P19957 117 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 CHATP28329 748 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 MEOX1P50221 254 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 RBPMSQ93062 196 aaKnown RBP14.45□□□□□ -0.1
CCDC43-202ENST00000457422 CHMP1AQ9HD42 196 aaPredicted RBP14.45□□□□□ -0.1
CCDC43-202ENST00000457422 DECR2Q9NUI1 292 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 ZNF581Q9P0T4 197 aa14.45□□□□□ -0.1
CCDC43-202ENST00000457422 A0A096LPE4 126 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 TRBV6-7A0A0A0MS04 114 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 A0A1W2PPZ6 126 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 KANTRA0A1W2PQU2 76 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 C5orf51A6NDU8 294 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 EEF1E1-BLOC1S5C9J1V9 151 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 SPDEFO95238 335 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 PSMB6P28072 239 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 PDZK1IP1Q13113 114 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 C3AR1Q16581 482 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 TAF9Q16594 264 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 ATP1A1-AS1Q5TC04 95 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 NAXEQ8NCW5 288 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 VRK1Q99986 396 aaPredicted RBP14.44□□□□□ -0.1
CCDC43-202ENST00000457422 ANXA10Q9UJ72 324 aa14.44□□□□□ -0.1
CCDC43-202ENST00000457422 MFSD2BA6NFX1 497 aa14.43□□□□□ -0.1
CCDC43-202ENST00000457422 RLN2P04090 185 aa14.43□□□□□ -0.1
CCDC43-202ENST00000457422 FOXG1P55316 489 aaPredicted RBP14.43□□□□□ -0.1
CCDC43-202ENST00000457422 ATXN7L3Q14CW9 347 aaPredicted RBP14.43□□□□□ -0.1
CCDC43-202ENST00000457422 RNPS1Q15287 305 aaKnown RBP14.43□□□□□ -0.1
CCDC43-202ENST00000457422 SLC9A3R2Q15599 337 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms