RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 OR9K2Q8NGE7 335 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 OR8U1Q8NH10 309 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 SPACA9Q96E40 222 aaPredicted RBP15.47■□□□□ 0.07
PTPN6-204ENST00000456013 ARV1Q9H2C2 271 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 PADI1Q9ULC6 663 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 APOC1P02654 83 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 LBX1P52954 281 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 PHYHD1Q5SRE7 291 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 ZNF574Q6ZN55 896 aaPredicted RBP15.47■□□□□ 0.07
PTPN6-204ENST00000456013 TMEM54Q969K7 222 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 NABP1Q96AH0 204 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 AKR1E2Q96JD6 320 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 OR6C1Q96RD1 312 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 RASL10BQ96S79 203 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 USB1Q9BQ65 265 aaKnown RBP15.47■□□□□ 0.07
PTPN6-204ENST00000456013 HDHD3Q9BSH5 251 aaPredicted RBP15.47■□□□□ 0.07
PTPN6-204ENST00000456013 ATPIF1Q9UII2 106 aa15.47■□□□□ 0.07
PTPN6-204ENST00000456013 FBXO9Q9UK97 447 aaPredicted RBP15.47■□□□□ 0.07
PTPN6-204ENST00000456013 SRFP11831 508 aa15.46■□□□□ 0.07
PTPN6-204ENST00000456013 H3F3AP84243 136 aa15.46■□□□□ 0.07
PTPN6-204ENST00000456013 SMIM3Q9BZL3 60 aa15.46■□□□□ 0.07
PTPN6-204ENST00000456013 FAM212BQ9NTI7 297 aaPredicted RBP15.46■□□□□ 0.07
PTPN6-204ENST00000456013 STARD10Q9Y365 291 aa15.46■□□□□ 0.07
PTPN6-204ENST00000456013 MSTNO14793 375 aa15.46■□□□□ 0.06
PTPN6-204ENST00000456013 SCRG1O75711 98 aa15.46■□□□□ 0.06
PTPN6-204ENST00000456013 OR5H8P0DN80 308 aa15.46■□□□□ 0.06
PTPN6-204ENST00000456013 RAB5BP61020 215 aa15.46■□□□□ 0.06
PTPN6-204ENST00000456013 HABP2Q14520 560 aaPredicted RBP15.46■□□□□ 0.06
PTPN6-204ENST00000456013 SECTM1Q8WVN6 248 aa15.46■□□□□ 0.06
PTPN6-204ENST00000456013 MED12Q93074 2177 aa15.45■□□□□ 0.06
PTPN6-204ENST00000456013 COMMD1Q8N668 190 aa15.45■□□□□ 0.06
PTPN6-204ENST00000456013 ERGIC1Q969X5 290 aa15.45■□□□□ 0.06
PTPN6-204ENST00000456013 SPSB2Q99619 263 aa15.45■□□□□ 0.06
PTPN6-204ENST00000456013 KCNIP3Q9Y2W7 256 aa15.45■□□□□ 0.06
PTPN6-204ENST00000456013 E5RGE8 158 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 M0R135 149 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 TMEM225BP0DP42 221 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 SNCAP37840 140 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 ZNF385CQ66K41 422 aaPredicted RBP15.44■□□□□ 0.06
PTPN6-204ENST00000456013 LCN10Q6JVE6 187 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 PLXDC2Q6UX71 529 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 LRRC18Q8N456 261 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 KDF1Q8NAX2 398 aaPredicted RBP15.44■□□□□ 0.06
PTPN6-204ENST00000456013 ZNF799Q96GE5 643 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 CRB3Q9BUF7 120 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 DEFB126Q9BYW3 111 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 LIME1Q9H400 295 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 NSG2Q9Y328 171 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 VCANP13611 3396 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 ASCC3Q8N3C0 2202 aaKnown RBP15.44■□□□□ 0.06
PTPN6-204ENST00000456013 TSPAN15O95858 294 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 SCGB1D2O95969 90 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 MBPP02686 304 aaPredicted RBP15.44■□□□□ 0.06
PTPN6-204ENST00000456013 SEC11BP0C7V7 166 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 PTAFRP25105 342 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 UCP2P55851 309 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 PIGPP57054 158 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 HGFACQ04756 655 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 C14orf79Q96F83 325 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 CLCC1Q96S66 551 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 METTL9Q9H1A3 318 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 NECAP2Q9NVZ3 263 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 HSF4Q9ULV5 492 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 MTCH2Q9Y6C9 303 aa15.44■□□□□ 0.06
PTPN6-204ENST00000456013 CHCHD2Q9Y6H1 151 aaPredicted RBP15.44■□□□□ 0.06
PTPN6-204ENST00000456013 DHHO43323 396 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 ONECUT2O95948 504 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 PPT1P50897 306 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 TMEM187Q14656 261 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 RNF212Q495C1 297 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 ETV3LQ6ZN32 361 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 GALNT14Q96FL9 552 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 FAAP24Q9BTP7 215 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 C19orf25Q9UFG5 118 aaPredicted RBP15.43■□□□□ 0.06
PTPN6-204ENST00000456013 CA14Q9ULX7 337 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 RTTNQ86VV8 2226 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 DBHP09172 617 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 DANCRP0C864 163 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 DTYMKP23919 212 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 MTCP1P56278 107 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 PRAMEF20Q5VT98 475 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 HIST1H2BAQ96A08 127 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 SGK3Q96BR1 496 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 ZNF385AQ96PM9 386 aaKnown RBP15.43■□□□□ 0.06
PTPN6-204ENST00000456013 SCRT1Q9BWW7 348 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 NAA60Q9H7X0 242 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 GPR173Q9NS66 373 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 AK3Q9UIJ7 227 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 LAMA1P25391 3075 aa15.43■□□□□ 0.06
PTPN6-204ENST00000456013 A0A087WZY1 265 aa15.42■□□□□ 0.06
PTPN6-204ENST00000456013 C1orf196B1AJZ1 125 aa15.42■□□□□ 0.06
PTPN6-204ENST00000456013 TP53I11O14683 189 aa15.42■□□□□ 0.06
PTPN6-204ENST00000456013 EIF3GO75821 320 aaKnown RBP eCLIP15.42■□□□□ 0.06
PTPN6-204ENST00000456013 CD63P08962 238 aa15.42■□□□□ 0.06
PTPN6-204ENST00000456013 COL19A1Q14993 1142 aa15.42■□□□□ 0.06
PTPN6-204ENST00000456013 SHBQ15464 509 aa15.42■□□□□ 0.06
PTPN6-204ENST00000456013 MIDNQ504T8 468 aa15.42■□□□□ 0.06
PTPN6-204ENST00000456013 AKIRIN2Q53H80 203 aa15.42■□□□□ 0.06
PTPN6-204ENST00000456013 LRTM2Q8N967 370 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms