RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SGCDQ92629 289 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 C12orf43Q96C57 262 aaKnown RBP7.33□□□□□ -1.24
COL28A1-205ENST00000453441 RAB39BQ96DA2 213 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 ADAT3Q96EY9 351 aaPredicted RBP7.33□□□□□ -1.24
COL28A1-205ENST00000453441 COX4I2Q96KJ9 171 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 OPALINQ96PE5 141 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 BPESC1Q9GZL8 116 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 TMEM138Q9NPI0 162 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 GPR173Q9NS66 373 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 C1orf123Q9NWV4 160 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 RASL12Q9NYN1 266 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 FOXJ3Q9UPW0 622 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 WIPI2Q9Y4P8 454 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 PPIAL4AQ9Y536 164 aa7.33□□□□□ -1.24
COL28A1-205ENST00000453441 SIRT4Q9Y6E7 314 aaPredicted RBP7.33□□□□□ -1.24
COL28A1-205ENST00000453441 MAP1AP78559 2803 aaPredicted RBP7.33□□□□□ -1.24
COL28A1-205ENST00000453441 TRBV5-7A0A0A0MS05 114 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 TRAV38-1A0A0B4J264 116 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 hCG_1807616A0A1W2PRN6 198 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 LGALS8O00214 317 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 CCRL2O00421 344 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 NOS1APO75052 506 aaPredicted RBP7.32□□□□□ -1.24
COL28A1-205ENST00000453441 ARL6IP5O75915 188 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 LHBP01229 141 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 IGHV2-70P01814 119 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 HSMCR30P0CW71 290 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 CD99P14209 185 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 MAP2K4P45985 399 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 HAAOP46952 286 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 GZMKP49863 264 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 GPM6AP51674 278 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 RPS11P62280 158 aaKnown RBP eCLIP7.32□□□□□ -1.24
COL28A1-205ENST00000453441 MPPED2Q15777 294 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 UBE2V2Q15819 145 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 LIPKQ5VXJ0 399 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 TEX36Q5VZQ5 186 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 ZNF529Q6P280 563 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 WDR82Q6UXN9 313 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 LRRC28Q86X40 367 aaPredicted RBP7.32□□□□□ -1.24
COL28A1-205ENST00000453441 PHC2Q8IXK0 858 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 MKXQ8IYA7 352 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 Q8IYB0 196 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 SAXO1Q8IYX7 474 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 NKAIN3Q8N8D7 197 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 ZFP41Q8N8Y5 198 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 ZSCAN4Q8NAM6 433 aaPredicted RBP7.32□□□□□ -1.24
COL28A1-205ENST00000453441 SCCPDHQ8NBX0 429 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 TSPAN14Q8NG11 270 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 OR13C9Q8NGT0 318 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 LRRC29Q8WV35 223 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 DVL3Q92997 716 aaPredicted RBP7.32□□□□□ -1.24
COL28A1-205ENST00000453441 C18orf12Q96KH6 178 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 DERL3Q96Q80 235 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 DNTTIP1Q9H147 329 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 UFSP2Q9NUQ7 469 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 NDUFB11Q9NX14 153 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 F8P00451 2351 aa7.32□□□□□ -1.24
COL28A1-205ENST00000453441 A0A096LNT2 108 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 FAM230AA0A1W2PPH8 454 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 OOEPA6NGQ2 149 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 SRRM5B3KS81 715 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 LYNX1G3V0Z9 82 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 H3BSH0 61 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 H7C1Q1 480 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 CDIPTO14735 213 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 LMX1BO60663 402 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 SC5DO75845 299 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 HCKP08631 526 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 LYNX1P0DP58 116 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 IGFBP3P17936 291 aaPredicted RBP7.31□□□□□ -1.24
COL28A1-205ENST00000453441 PCMT1P22061 227 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 PSMB9P28065 219 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 BDKRB2P30411 391 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 TGFBR2P37173 567 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 PMELP40967 661 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 SOX2P48431 317 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 BMXP51813 675 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 MTCP1P56278 107 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 SMIM21Q3B7S5 101 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 ZNF404Q494X3 552 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 ACSM3Q53FZ2 586 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 SPRNQ5BIV9 151 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 ARMCX4Q5H9R4 360 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 SYT6Q5T7P8 510 aaPredicted RBP7.31□□□□□ -1.24
COL28A1-205ENST00000453441 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.31□□□□□ -1.24
COL28A1-205ENST00000453441 HAGHLQ6PII5 290 aaPredicted RBP7.31□□□□□ -1.24
COL28A1-205ENST00000453441 FIP1L1Q6UN15 594 aaKnown RBP7.31□□□□□ -1.24
COL28A1-205ENST00000453441 UNQ9370/PRO34162Q6UXP9 181 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 DCDC5Q6ZRR9 648 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 NLRC3Q7RTR2 1065 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 BIVMQ86UB2 503 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 C11orf53Q8IXP5 236 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 GCSAMQ8N6F7 178 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 PNLDC1Q8NA58 520 aaKnown RBP7.31□□□□□ -1.24
COL28A1-205ENST00000453441 POC1AQ8NBT0 407 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 ZNF420Q8TAQ5 688 aaPredicted RBP7.31□□□□□ -1.24
COL28A1-205ENST00000453441 AQP3Q92482 292 aa7.31□□□□□ -1.24
COL28A1-205ENST00000453441 RPL3LQ92901 407 aaKnown RBP7.31□□□□□ -1.24
COL28A1-205ENST00000453441 FOXRED1Q96CU9 486 aaPredicted RBP7.31□□□□□ -1.24
COL28A1-205ENST00000453441 C1orf159Q96HA4 380 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms