RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 FAM230AA0A1W2PPH8 454 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 PTGES3LE9PB15 166 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 TRAPPC2LH3BP13 241 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 J3QT63 122 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 ADAM20O43506 726 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 CDK1P06493 297 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 HNF1AP20823 631 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 MPZP25189 248 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 PITPNBP48739 271 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 GNB2P62879 340 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 RNLSQ5VYX0 342 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 FAHD2BQ6P2I3 314 aaPredicted RBP16.61■□□□□ 0.25
COL9A3-202ENST00000452372 NANOGP1Q8N7R0 232 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 DNAAF1Q8NEP3 725 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 OR4M2Q8NGB6 313 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 TRMT10AQ8TBZ6 339 aaKnown RBP16.61■□□□□ 0.25
COL9A3-202ENST00000452372 MYDGFQ969H8 173 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 SEH1LQ96EE3 360 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 FAHD2AQ96GK7 314 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 CLN8Q9UBY8 286 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 TPRKBQ9Y3C4 175 aa16.61■□□□□ 0.25
COL9A3-202ENST00000452372 SIRT4Q9Y6E7 314 aaPredicted RBP16.61■□□□□ 0.25
COL9A3-202ENST00000452372 NOS1APO75052 506 aaPredicted RBP16.6■□□□□ 0.25
COL9A3-202ENST00000452372 ACAA1P09110 424 aaPredicted RBP16.6■□□□□ 0.25
COL9A3-202ENST00000452372 ATF1P18846 271 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 GLRA1P23415 457 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 NPY4RP50391 375 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 GMFBP60983 142 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 ATPAF1Q5TC12 328 aaPredicted RBP16.6■□□□□ 0.25
COL9A3-202ENST00000452372 DCAF12L2Q5VW00 463 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 WDR25Q64LD2 544 aaPredicted RBP16.6■□□□□ 0.25
COL9A3-202ENST00000452372 CALHM1Q8IU99 346 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 NPRL2Q8WTW4 380 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 BORCS8Q96FH0 119 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 PKIBQ9C010 78 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 MMP26Q9NRE1 261 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 RASL12Q9NYN1 266 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 CTSZQ9UBR2 303 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 DNAJB11Q9UBS4 358 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 ERGIC3Q9Y282 383 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 POLDIP2Q9Y2S7 368 aa16.6■□□□□ 0.25
COL9A3-202ENST00000452372 IGKV1-27A0A075B6S5 117 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 IGKV1-9A0A0C4DH69 117 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 J3QLI3 93 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 MYL12BO14950 172 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 SYNGR1O43759 233 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 PGA5P0DJD9 388 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 PRKACBP22694 351 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 WNT4P56705 351 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 SLC35A2P78381 396 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 IL24Q13007 206 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 STUMQ69YW2 141 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 DMKNQ6E0U4 476 aaPredicted RBP16.59■□□□□ 0.25
COL9A3-202ENST00000452372 ANGPTL5Q86XS5 388 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 SERPINA12Q8IW75 414 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 PARP16Q8N5Y8 322 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 POC1AQ8NBT0 407 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 OR5D14Q8NGL3 314 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 RGP1Q92546 391 aaPredicted RBP16.59■□□□□ 0.25
COL9A3-202ENST00000452372 TMIGD2Q96BF3 282 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 SMIM19Q96E16 107 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 CNBD2Q96M20 576 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 CDCA4Q9BXL8 241 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 TMPRSS13Q9BYE2 586 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 DNTTIP1Q9H147 329 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 DUSP21Q9H596 190 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 PAK1IP1Q9NWT1 392 aaPredicted RBP16.59■□□□□ 0.25
COL9A3-202ENST00000452372 OR5V1Q9UGF6 321 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 DHDHQ9UQ10 334 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 PCDHGB5Q9Y5G0 923 aa16.59■□□□□ 0.25
COL9A3-202ENST00000452372 TMPRSS2O15393 492 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 ALX3O95076 343 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 MT-ND2P03891 347 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 AMY2BP19961 511 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 AZGP1P25311 298 aaKnown RBP16.58■□□□□ 0.24
COL9A3-202ENST00000452372 RBP2P50120 134 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 ATP1B3P54709 279 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 TAS2R43P59537 309 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 PAX2Q02962 417 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 SLC36A1Q7Z2H8 476 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 OR5T2Q8NGG2 359 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 ANGPTL6Q8NI99 470 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 GPR148Q8TDV2 347 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 TSEN15Q8WW01 171 aaKnown RBP16.58■□□□□ 0.24
COL9A3-202ENST00000452372 SPSB1Q96BD6 273 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 CCL13Q99616 98 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 C19orf24Q9BVV8 132 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 ZCCHC4Q9H5U6 513 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 SNTG1Q9NSN8 517 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 NLKQ9UBE8 527 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 ZNF281Q9Y2X9 895 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 INSIG2Q9Y5U4 225 aa16.58■□□□□ 0.24
COL9A3-202ENST00000452372 CRHBPP24387 322 aa16.57■□□□□ 0.24
COL9A3-202ENST00000452372 MTCP1P56278 107 aa16.57■□□□□ 0.24
COL9A3-202ENST00000452372 OR13C9Q8NGT0 318 aa16.57■□□□□ 0.24
COL9A3-202ENST00000452372 RAB40AQ8WXH6 277 aa16.57■□□□□ 0.24
COL9A3-202ENST00000452372 SGCDQ92629 289 aa16.57■□□□□ 0.24
COL9A3-202ENST00000452372 GHSRQ92847 366 aa16.57■□□□□ 0.24
COL9A3-202ENST00000452372 DACT3Q96B18 629 aaPredicted RBP16.57■□□□□ 0.24
COL9A3-202ENST00000452372 ZNF488Q96MN9 340 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms